Yes, the newest pipelines used an option that isn't in the 1.2.3 release. Grab the "dev_latest" zip file that matches your OS from here:
http://brainvis.wustl.edu/workbench/ Tim On Mon, Mar 12, 2018 at 5:57 PM, Viessmann, Olivia M. < oviessm...@mgh.harvard.edu> wrote: > Hello, > > > I am running the PostFreeSurferPipeLineBatch.sh script from the > Pipelines/Examples/Scripts/ on the example subject 100307. I've > successfully tun the PreFreeSurfer and FreeSurfer scripts, but ran into the > following problem with the PostFreeSurfer script when it calls wb_command > > I get the following error > > While running: > ${HOME}/HCPData/workbench/bin_rh_linux64/../exe_rh_linux64/wb_command > -surface-distortion ${HOME}/HCPData/Pipelines_ExampleData/100307/ > MNINonLinear/Native/100307.L.sphere.native.surf.gii > ${HOME}/HCPData/Pipelines_ExampleData/100307/MNINonLinear/Native/100307.L. > sphere.reg.reg_LR.native.surf.gii ${HOME}/HCPData/Pipelines_ > ExampleData/100307/MNINonLinear/Native/100307.L.Strain_FS.native.shape.gii > -local-affine-method > > ERROR: Unexpected parameter: -local-affine-method > > Is the script relying on a newer version of wb_command? I downloaded the > binaries for workbench from here > https://www.humanconnectome.org/software/get-connectome-workbench > > Thanks a lot in advance > Olivia > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
