Hi, Have you configured your R installation correctly, per the FSL FIX Wiki page?
https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FIX/UserGuide cheers, -MH -- Michael Harms, Ph.D. ----------------------------------------------------------- Associate Professor of Psychiatry Washington University School of Medicine Department of Psychiatry, Box 8134 660 South Euclid Ave. Tel: 314-747-6173 St. Louis, MO 63110 Email: mha...@wustl.edu From: <hcp-users-boun...@humanconnectome.org> on behalf of "Jayasekera, Dinal" <dinal.jayasek...@wustl.edu> Date: Thursday, November 1, 2018 at 4:10 PM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org> Subject: [HCP-Users] Debugging IcaFIxProcessingBatch.sh Dear HCP community, I am currently running the IcaFixProcessingBatch script on the data processing using the minimal functional pipelines. However, for each of my resting state conditions, I get the following error: /home/Desktop/Applications/fix1.066/fix: 252: /home/Desktop/Applications/fix1.066/fix: R: not found No valid labelling file specified Could not find a supported file with prefix "rfMRI_REST1_AP_hp2000.ica/filtered_func_data_clean" Has anyone had any experience with a similar issue? Is this error indicative of a missing step from before? Kind regards, Dinal Jayasekera PhD Candidate | InSITE Fellow Ammar Hawasli Lab Department of Biomedical Engineering | Washington University in St. Louis _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users ________________________________ The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
