Dear Bruce,

Sorry for late reply. I wanted to test in another computer before replying. Unfortunately, this time also I got different results for TAA. Following is the click by click description of what I am doing to arrive in this state:

Double click on “Atemis” shortcut on desktop => Click “add” in the Feff calculation tab => Open “TPP” Atom input file from desktop=> Click “Run Atom” => Click “Run Feff” => Click “add” in the Feff calculation tab => Open “TAA” CIF file from desktop=> Click “Run Atom” => Click “Run Feff”

I am sorry for killing your time. Actually, I am very much new in this field and therefore I really want to be sure that what I am doing for importing object for feff calculation is correct or not. Thank you very much for your support.

With regards,


On 2017-03-28 16:13, Bruce Ravel wrote:
On 03/27/2017 11:02 AM, Ashis Biswas wrote:
Thank you very much for your reply. Here I am attaching two Artemis
projects files (TAA_TPA and TPA_TAA), named according to their order of
import. In my computer the paths for *TAA* are different in two project
files. For example, i) in TAA_TPA project the Reff for three single
scattering paths of O (@O1.1; @O3.1, and @O5.1) are different to that in
TPA_TAA project, ii) the single scattering path @C5.1 (path number 6) at
Reff of 2.682 A0 in TAA_TPA project is missing in TPA_TAA project, and
so on.

I am also attaching the papers from where the coordinates for TAA and
TPA are obtained: TAA (Kamenar et al., 1993: tables 1 & 2; Fig. 1) and
TPA (Pappalardo et al., 1983: Table 1; Fig. 1).

I agree that the TPA_TAA.fpj project file that you sent me has incorrect data in the Feff tab for TAA.

I have not, however, been able to reproduce that here. And not for want of trying -- I spent the last half hour trying to find a way to replicate what you are showing in the TPA_TAA file. Regardless of the order in which I import the two structures and regardless of whether I have discarded and reimported Feff calculations, when I click the "Run Atoms" button on the TAA cif file, I /always/ get the structure from Table 4 in the Kamenar paper. I cannot reproduce the Feff tab that you show in your TPA_TAA project file.

I have no idea how you got into the state you show in the TPA_TAA project. It is clear that something went awry, but I don't know if it is an error of the program or of the user. I can't fix a problem I can't observe.

I understand that this is not the answer you were looking for. I am simply not seeing the problem you are reporting.


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