One possibility is that the motor controller is pulling the pin low (maybe
weakly, so this is why you're not reading it as a short) and whenever you
are booting into bootloader manually, you're getting a configuration wipe
as result, which causes the fast blink (loss of clock calibration).

On Sun, Mar 6, 2016 at 6:10 PM, Colby LaRue <[email protected]>
wrote:

> Nothing is connected to boot pin
> On Mar 6, 2016 8:09 PM, "Colby LaRue" <[email protected]> wrote:
>
>> Yes I have a motor driver board connected there. It controls the
>> direction of a DC motor. High for one direaction, low for the other.
>> On Mar 6, 2016 8:01 PM, "Ytai Ben-Tsvi" <[email protected]> wrote:
>>
>>> Is there anything at all connected to pin 1, which might pull the pin
>>> low sometimes? Is there anything that might be pulling the boot pin low
>>> sometimes (causing the IOIO to boot into bootloader mode)? Other than that,
>>> I don't think there's much we can do. Well-behaved IOIO boards do not
>>> behave like you describe.
>>>
>>> On Sun, Mar 6, 2016 at 5:49 PM, Colby LaRue <[email protected]>
>>> wrote:
>>>
>>>> The board doesn't have continuity between ground and pin 1. It is a
>>>> spark fun board. It's hard soldered onto a circuit, so replacing it
>>>> wouldn't be fun.
>>>> On Mar 6, 2016 7:27 PM, "Ytai Ben-Tsvi" <[email protected]> wrote:
>>>>
>>>>> Sorry, hit send too soon...
>>>>> That would happen if you short pin 1 to GND while booting into
>>>>> bootloader mode. If you are sure this is not the case, sounds like you
>>>>> might have a faulty unit. Try replacing it. Is it from one of the official
>>>>> manufacturers?
>>>>> On Mar 6, 2016 5:24 PM, "Ytai Ben-Tsvi" <[email protected]> wrote:
>>>>>
>>>>>> One thing that might cause this is if the configuration gets wiped
>>>>>> all the time.
>>>>>> On Mar 6, 2016 4:02 PM, "Colby LaRue" <[email protected]>
>>>>>> wrote:
>>>>>>
>>>>>>> When I power the IOIO board, the stat light is flashing quickly.
>>>>>>> Plugging in to a computer fixes it, but I have to do that multiple times
>>>>>>> for it to finally work. It will only work a short while. The next time 
>>>>>>> the
>>>>>>> board is powered up, the flashing light comes up again. I have flashed 
>>>>>>> the
>>>>>>> newest firmware to it, and still no luck. I should not be having to plug
>>>>>>> this thing in every time I want to use it.
>>>>>>>
>>>>>>> Thanks for your feedback and help
>>>>>>> Colby
>>>>>>>
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