gwlucastrig commented on a change in pull request #98:
URL: https://github.com/apache/commons-imaging/pull/98#discussion_r491751220



##########
File path: 
src/main/java/org/apache/commons/imaging/formats/tiff/datareaders/DataReaderStrips.java
##########
@@ -291,25 +318,50 @@ public BufferedImage readImageData(final Rectangle 
subImage)
         //        or working
         final ImageBuilder workingBuilder =
                 new ImageBuilder(width, workingHeight, false);
-
-        for (int strip = strip0; strip <= strip1; strip++) {
-            final long rowsPerStripLong = 0xFFFFffffL & rowsPerStrip;
-            final long rowsRemaining = height - (strip * rowsPerStripLong);
-            final long rowsInThisStrip = Math.min(rowsRemaining, 
rowsPerStripLong);
-            final long bytesPerRow = (bitsPerPixel * width + 7) / 8;
-            final long bytesPerStrip = rowsInThisStrip * bytesPerRow;
-            final long pixelsPerStrip = rowsInThisStrip * width;
-
-            final byte[] compressed = imageData.getImageData(strip).getData();
-
-            final byte[] decompressed = decompress(compressed, compression,
-                    (int) bytesPerStrip, width, (int) rowsInThisStrip);
-
-            interpretStrip(
-                    workingBuilder,
-                    decompressed,
-                    (int) pixelsPerStrip,
-                    yLimit);
+        if (planarConfiguration != 2) {
+            for (int strip = strip0; strip <= strip1; strip++) {
+                final long rowsPerStripLong = 0xFFFFffffL & rowsPerStrip;
+                final long rowsRemaining = height - (strip * rowsPerStripLong);
+                final long rowsInThisStrip = Math.min(rowsRemaining, 
rowsPerStripLong);
+                final long bytesPerRow = (bitsPerPixel * width + 7) / 8;
+                final long bytesPerStrip = rowsInThisStrip * bytesPerRow;
+                final long pixelsPerStrip = rowsInThisStrip * width;
+
+                final byte[] compressed = 
imageData.getImageData(strip).getData();
+
+                final byte[] decompressed = decompress(compressed, compression,
+                  (int) bytesPerStrip, width, (int) rowsInThisStrip);
+
+                interpretStrip(
+                  workingBuilder,
+                  decompressed,
+                  (int) pixelsPerStrip,
+                  yLimit);
+            }
+        } else {
+            int nStripsInPlane = imageData.getImageDataLength() / 3;
+            for (int strip = strip0; strip <= strip1; strip++) {
+                final long rowsPerStripLong = 0xFFFFffffL & rowsPerStrip;
+                final long rowsRemaining = height - (strip * rowsPerStripLong);
+                final long rowsInThisStrip = Math.min(rowsRemaining, 
rowsPerStripLong);
+                final long bytesPerRow = (bitsPerPixel * width + 7) / 8;
+                final long bytesPerStrip = rowsInThisStrip * bytesPerRow;
+                final long pixelsPerStrip = rowsInThisStrip * width;
+
+                byte[] b = new byte[(int) bytesPerStrip];
+                for (int iPlane = 0; iPlane < 3; iPlane++) {
+                    int planeStrip = iPlane * nStripsInPlane + strip;
+                    final byte[] compressed = 
imageData.getImageData(planeStrip).getData();
+                    final byte[] decompressed = decompress(compressed, 
compression,
+                      (int) bytesPerStrip, width, (int) rowsInThisStrip);
+                    int index = iPlane;
+                    for (int i = 0; i < decompressed.length; i++) {
+                        b[index] = decompressed[i];
+                        index += 3;
+                    }
+                }
+                interpretStrip(workingBuilder, b, (int) pixelsPerStrip, 
height);
+            }

Review comment:
       These are two methods have a lot of redundancy and it would be better to 
combine them into one.  Unfortunately, they are both public APIs, so I'm not 
sure we could change their external appearance.   Of course, we could create a 
single, consolidated method that does the processing. Then we could rewrite the 
existing methods to be "wrapper" methods that called the new consolidated 
method.
   
   I think it might be better to treat that change as a separate pull request.
   
   I contributed the "sub-image" logic a number of years ago. At the time, 
there was a certain amount of resistance to the idea of a sub-image API, but I 
thought it was necessary because may GeoTIFFs are huge (I'd been working with 
some that are 20000-by-20000 pixels large).  Anyway, I think I left the 
original method in place because the code was simpler than the sub-image code 
and I thought it would serve as a reference for anyone who was trying to figure 
out how it worked.  But I think you are right and the time has come to clean 
things up. 

##########
File path: 
src/main/java/org/apache/commons/imaging/formats/tiff/TiffImageData.java
##########
@@ -140,8 +145,8 @@ public ImageDataReader getDataReader(final TiffDirectory 
directory,
     public abstract ImageDataReader getDataReader(TiffDirectory directory,
             PhotometricInterpreter photometricInterpreter, int bitsPerPixel,
             int[] bitsPerSample, int predictor, int samplesPerPixel, int width,
-            int height, int compression, ByteOrder byteOrder) throws 
IOException,
-            ImageReadException;
+      int height, int compression, int planarConfiguration,
+      ByteOrder byteOrder) throws IOException,            ImageReadException;

Review comment:
       Some of the spacing got accidentally modified when I edited file.  I 
thought I cleaned them all, but I missed this one. Sorry.

##########
File path: 
src/main/java/org/apache/commons/imaging/formats/tiff/datareaders/DataReaderStrips.java
##########
@@ -237,27 +240,51 @@ private void interpretStrip(
 
     @Override
     public void readImageData(final ImageBuilder imageBuilder)
-            throws ImageReadException, IOException {
-        for (int strip = 0; strip < imageData.getImageDataLength(); strip++) {
-            final long rowsPerStripLong = 0xFFFFffffL & rowsPerStrip;
-            final long rowsRemaining = height - (strip * rowsPerStripLong);
-            final long rowsInThisStrip = Math.min(rowsRemaining, 
rowsPerStripLong);
-            final long bytesPerRow = (bitsPerPixel * width + 7) / 8;
-            final long bytesPerStrip = rowsInThisStrip * bytesPerRow;
-            final long pixelsPerStrip = rowsInThisStrip * width;
-
-            final byte[] compressed = imageData.getImageData(strip).getData();
-
-            final byte[] decompressed = decompress(compressed, compression,
-                    (int) bytesPerStrip, width, (int) rowsInThisStrip);
-
-            interpretStrip(
-                    imageBuilder,
-                    decompressed,
-                    (int) pixelsPerStrip,
-                    height);
-
+      throws ImageReadException, IOException {
+        if (planarConfiguration != 2) {

Review comment:
       You are absolutely right about using the TiffTagConstant values in the 
places you cited.  Actually, I wanted to make line 244 test for 
planarConfiguration == "Chunky" rather than != "Planar", but I was afraid that 
there might be places in the code where the planarConfiguration variable didn't 
get set correctly.  So I thought this would be safer.
   
   If we ever get our hands on some additional test files, I might revisit 
this.  But that may be unlikely...  The Tiff Specification itself describes 
planar-configuration 2 as follows: _PlanarConfiguration=2 is not currently in 
widespread use and it is not recommended for general interchange. It is used an 
extension and Baseline TIFF readers are not required to support it._

##########
File path: 
src/test/java/org/apache/commons/imaging/formats/tiff/datareaders/DataReaderStripsTest.java
##########
@@ -24,7 +24,7 @@
     @Test
     public void testApplyPredictor() throws Exception {
         final int[] bitsPerPixel = {1,2,3};
-        final DataReaderStrips strips = new DataReaderStrips(null, null, 3, 
bitsPerPixel, 2, 4, 0, 3, 1, 1, null, 2, null);
+        final DataReaderStrips strips = new DataReaderStrips(null, null, 3, 
bitsPerPixel, 2, 4, 0, 3, 1, 1, 1, null, 2, null);

Review comment:
       Agreed. Good catch.

##########
File path: 
src/main/java/org/apache/commons/imaging/formats/tiff/datareaders/DataReaderStrips.java
##########
@@ -291,25 +318,50 @@ public BufferedImage readImageData(final Rectangle 
subImage)
         //        or working
         final ImageBuilder workingBuilder =
                 new ImageBuilder(width, workingHeight, false);
-
-        for (int strip = strip0; strip <= strip1; strip++) {
-            final long rowsPerStripLong = 0xFFFFffffL & rowsPerStrip;
-            final long rowsRemaining = height - (strip * rowsPerStripLong);
-            final long rowsInThisStrip = Math.min(rowsRemaining, 
rowsPerStripLong);
-            final long bytesPerRow = (bitsPerPixel * width + 7) / 8;
-            final long bytesPerStrip = rowsInThisStrip * bytesPerRow;
-            final long pixelsPerStrip = rowsInThisStrip * width;
-
-            final byte[] compressed = imageData.getImageData(strip).getData();
-
-            final byte[] decompressed = decompress(compressed, compression,
-                    (int) bytesPerStrip, width, (int) rowsInThisStrip);
-
-            interpretStrip(
-                    workingBuilder,
-                    decompressed,
-                    (int) pixelsPerStrip,
-                    yLimit);
+        if (planarConfiguration != 2) {

Review comment:
       Agreed. Good catch.

##########
File path: 
src/main/java/org/apache/commons/imaging/formats/tiff/TiffImageParser.java
##########
@@ -898,7 +921,7 @@ TiffRasterData getFloatingPointRasterData(
 
         final ImageDataReader dataReader = imageData.getDataReader(directory,
             photometricInterpreter, bitsPerPixel, bitsPerSample, predictor,
-            samplesPerPixel, width, height, compression, byteOrder);
+          samplesPerPixel, width, height, compression, 1, byteOrder);

Review comment:
        Agreed. Good catch.




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