my mistake - the web services window, where it says http://www.compbio.dundee.ac.uk/jabaws
not the connections tab. apols. ----- Original Message ----- From: James RF Sutton To: [email protected] Sent: Friday, November 22, 2013 2:45 PM Subject: web service config prob Hi Jalview I am a huge fan of the software. recently, though, I have been trying to update my Java and this seems to have caused some problems with Jalview - when i try to open a fasta multiple alignment from NCBI Blast, and opt in to Google analytics, I am advised that I cannot connect to dundee, : URL's that could not be contacted: http://www.compbio.dundee.ac.uk/jabaws ....etc I know how to change them, could you please tell me what they need to be changed to : currently they are set to: http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-newId+(([uniprot-all:$SEQUENCE_ID$]))+-view+SwissEntry and attempting to add new i dont know what works.
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