Hello!
I hope this is the right place where to get some suggestions or solutions to my problem. I am using JalviewLite Linked Applets on my website. Problem is that I would like to link protein multiple sequence alignment (MSA) with its corresponding DNA alignment, meaning that, if I click on the amino acid in some sequence in protein MSA view then the corresponding codon (three nucleotides) should be highlighted by jalview on the follower view. Simpler solution would be for example, if I click on the second amino acid in some protein sequence in MSA then the fourth nucleotide should be highlighted (maybe n*3-2 correction?). At the moment if I enter a protein MSA to main view and corresponding nucleotide MSA to follower view and I select a protein at second position then second nucleotide highlights on follower view. I hope this problem is understandable and someone can help me. All the Best, Mikk Puustusmaa [email protected]
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