Hi all,
Sorry to bring this up from 2011
####
http://www.compbio.dundee.ac.uk/pipermail/jalview-discuss/2011-April/000581.html
> Hi everyone,
>
> Sorry if this is something that has been discussed before, I looked
> for it and couldn't find any info.
>
> In large multiple alignments, it can be convenient to hide positions
> (columns) where more than a certain fraction of sequences have gaps.
> I've seen that option in other editors (e.g. MUST). Is there a way to
> do this in Jalview? If not, does anyone think it would be worthwhile
> to implement?
####
I am having the same problem now and I can’t figure out how to do this.
Has anything been done in this direction?
Right now I am using a simple script (awk/sed) to remove columns of gaps from
the alignment and loading multiple files into jalview (ie: original file + gaps
over 90% deleted + gaps over 75% deleted). Does anybody have a better solution?
Thanks very much in advance
Rafa
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