Miguel, all the FAH files do not have structure information; no info on residue name, nor what carbons are the alpha carbons...
I know you've been looking at secondary structure detection, but what about alpha carbon detection or even residue detection... I know it might be slow, but it would be very helpfull to be able to detect certain structure, let's say alpha carbons to start with... I also know that the polyhedral command does a bit of structure detection, and I was wondering if we could split this out a bit... that is, have a script command to force detection of certain structures, i.e. alpha carbons, being a C connected to a N, a C=O... let's just assume we're dealing with proteins here... that's up to the user of the command (say: find alphacarbon)... And when this is in place, we can start add nice graphics to the FAH page... Egon ------------------------------------------------------- This SF.Net email is sponsored by: IntelliVIEW -- Interactive Reporting Tool for open source databases. Create drag-&-drop reports. Save time by over 75%! Publish reports on the web. Export to DOC, XLS, RTF, etc. Download a FREE copy at http://www.intelliview.com/go/osdn_nl _______________________________________________ Jmol-developers mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-developers
