> for me, the source of the major quantity of PDB formated files is the > RCSB/PDB, therefore if a *.ca is recognized as being part of a protein, > and this is the case with > 1alm > select *.ca & protein > 2989 atoms selected > (or > select backbone & protein > ) > I expected that the *.ca trace or backbone (all what is only dependent > on the *.ca of amino acids / or *.p of nucleic) could be rendered. > Furthermore, this is RasMol/Chime compatible.
Good points. Particularly since you can say select *.ca & protein Q: What does RasMol do if you try to do a trace or a cartoon? I think another problem may be that I have a number of assumptions in the code that all 4 atoms of the backbone are present. I will file a bug report and take another look at this when I work on nucleotide chain backbones & secondary structure graphical representations. Miguel ------------------------------------------------------- This SF.Net email is sponsored by: Oracle 10g Get certified on the hottest thing ever to hit the market... Oracle 10g. Take an Oracle 10g class now, and we'll give you the exam FREE. http://ads.osdn.com/?ad_id=3149&alloc_id=8166&op=click _______________________________________________ Jmol-users mailing list [EMAIL PROTECTED] https://lists.sourceforge.net/lists/listinfo/jmol-users
