> AFAIK backbone is not a spline,
True

>whereas all of the cartoon-based
> structures are, and that is the difference.  but I don't know why RasMol
> and Chime refuse to draw them for *.CA-only files - I just know they
> don't. :-)  so I defer to someone with more knowledge of RasMol and
> Chime code for the why of it.
>
> I certainly agree that Jmol could draw cartoon and trace for *.CA-only
> files - unless there is a technical issue.

Trace should not be a problem. I suspect that Roger may have implemented
Trace after strands ... and strands needs the other backbone atoms.

Cartoon probably will be a problem. The calculations need to use the C=O
orientation in order to know the plane of the residue. There are several
reasons why this is needed ... including the calculations to determine the
center axis of a cylinder (However, note that this calculation is *not*
being done correctly these days).


Miguel



-------------------------------------------------------
This SF.Net email is sponsored by: Oracle 10g
Get certified on the hottest thing ever to hit the market... Oracle 10g. 
Take an Oracle 10g class now, and we'll give you the exam FREE. 
http://ads.osdn.com/?ad_id=3149&alloc_id=8166&op=click
_______________________________________________
Jmol-users mailing list
[EMAIL PROTECTED]
https://lists.sourceforge.net/lists/listinfo/jmol-users

Reply via email to