Jan wrote: >> Please send me a script example. >> > load a_protein > restrict 1 > hbonds on > connect hbond (1.O) (1.N) > # invisible > hbonds on > # visible > connect delete (1.O) (1.N) > hbonds on > connect hbond (1.O) (1.N) > # invisible > connect delete (1.O) (1.N) > connect single (1.O) (1.N) > connect hbond (1.O) (1.N) > # *visible* hbond
very good script. > my opinion is, this is OK, hbonds should be created visible, as are > single or double bonds. I agree. There is some subtle interaction with some of the old rasmol-compatibility hbond code. I will investigate. This is a broader question but ... Q: Is there ever a reason why someone would want hbonds turned off? Q: Why should hbonds ever be treated differently from normal bonds? Q: If you read in a file that contains hbonds, do you want them displayed by default? >> Q: Please confirm that you are using the 10.00.51 release and tell me if >> you are still having problems with 'backbone 1' >> >> > it is fixed, my message and your fix overlap, now, with > the Jmol Version 10.00.51 2006-03-30 06:27 I have no > problems with backbone 1 Good. Miguel ------------------------------------------------------- This SF.Net email is sponsored by xPML, a groundbreaking scripting language that extends applications into web and mobile media. Attend the live webcast and join the prime developer group breaking into this new coding territory! http://sel.as-us.falkag.net/sel?cmd=lnk&kid0944&bid$1720&dat1642 _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
