-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 You could use Cytoscape (http://www.cytoscape.org/) to view the PPI network. If you have 3D structures, there is a plugin that uses Chimera to view the 3D structures of the nodes
On Apr 18, 2008, at 8:48 AM, lijo skb wrote: > Hi Angel, > > I have two set of protiens, 1) Hub- Protiens those can intract more > than two nuber of proteins. Usually in a PPi network, a protien > will act as hub to connect other protiens. > 2) Non-Hub-Proteins those have only less intracion profile than the > Hub proteins. > > Lijo > > > On Fri, Apr 18, 2008 at 6:03 PM, Angel Herraez > <[EMAIL PROTECTED]> wrote: > Hi lijo > > Could you please explain waht do you mean by "hub" and "hub protein"? > Best if you provide an example file > > > > ---------------------------------------------------------------------- > --- > This SF.net email is sponsored by the 2008 JavaOne(SM) Conference > Don't miss this year's exciting event. There's still time to save > $100. > Use priority code J8TL2D2. > http://ad.doubleclick.net/clk;198757673;13503038;p?http:// > java.sun.com/javaone > _______________________________________________ > Jmol-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/jmol-users > > > > -- > Manger Projects, > SooryaKiran Bioinformatics, > Centre for Bioinformatics, > University of Kerala, India. > +91 4714060948(off) > +91 9446515705(res) > ---------------------------------------------------------------------- > --- > This SF.net email is sponsored by the 2008 JavaOne(SM) Conference > Don't miss this year's exciting event. There's still time to save > $100. > Use priority code J8TL2D2. > http://ad.doubleclick.net/clk;198757673;13503038;p?http:// > java.sun.com/javaone_______________________________________________ > Jmol-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/jmol-users - ------------------------------------------------------------------- Rajarshi Guha <[EMAIL PROTECTED]> GPG Fingerprint: D070 5427 CC5B 7938 929C DD13 66A1 922C 51E7 9E84 - ------------------------------------------------------------------- Bus error -- driver executed. -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.8 (Darwin) iEYEARECAAYFAkgIpKIACgkQZqGSLFHnnoQLxACeOgqJ4P7vsWErsIg+qmDkEui8 Ls4An3GSntEVuRROfCXuMfuRv27YMSMM =9/aW -----END PGP SIGNATURE----- ------------------------------------------------------------------------- This SF.net email is sponsored by the 2008 JavaOne(SM) Conference Don't miss this year's exciting event. There's still time to save $100. Use priority code J8TL2D2. http://ad.doubleclick.net/clk;198757673;13503038;p?http://java.sun.com/javaone _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
