Dear Angel,

>> - With konqueror, or opera/firefox under linux 32-bits, I load the
>> applet and right click to display the "Java Applet Window".
>
> Is that the script console?

No the "Java Applet Window", when you right click.

>> windows the position of this Java Applet Window is correct; under
>> linux it goes on an extreme side (left or right) of the screen. Any
>> idea why ?
>
> That should be OS-specific, or Java-specific. I've read about having
> two monitors were either the console or the pop-up opens in the other
> one...

Yes, I think this is specific to linux; but this is not normal...

> That would depend on the official specification of the CML format.
> Jmol can be adapted to read anything the file contains, but it must
> be defined as an official format spec.

Yes, this is my understanding: so how to define a specific card for  
force field atom type in the CML file format recognized by Jmol:

For charges, Jmol recognizes:
<scalar dictRef="jmol:charge">-0.287</scalar>

Could we imagine, something similar for force field atom types such as:
<scalar dictRef="jmol:forcefield">CT</scalar>  ?

regards, Francois



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