Excellent.
Generally you just close your browser -- ALL windows, including the download
window and any JavaScript console -- and then start it again.
2009/11/22 Jan Halborg Jensen <jhjen...@kemi.ku.dk>
> Now it works. It's as though the update of the on the web page took a few
> hours to take effect, despite repeated reloads of the page?? Very strange!
>
> Anyway, thank you for the replies.
>
> Jan
>
> "Robert Hanson" <hans...@stolaf.edu> skrev:
> > Jan, this has nothing to do with Jmol.js. It's a change in the versions
> of
> > Jmol. I try to minimize that, but I think in the case of contourlines we
> may
> > have a backward-compatibility issue. First upgrade to the latest 11.8,
> and I
> > would appreciate your checking 11.9 as well. These are pretty recent
> fixes.
> >
> > Thanks.
> >
> > Bob
> >
> > 2009/11/22 Jan Halborg Jensen <jhjen...@kemi.ku.dk>
> >
> >> I get different results depending on whether I view
> >>
> >>
> http://propka.ki.ku.dk/~jhjensen/h2oprinc.xyz<http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.xyz>
> <http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.xyz>using
> >> Jmol on my computer or on my webspage (
> >>
> >>
> http://propka.ki.ku.dk/~jhjensen/h2odensity.hml<http://propka.ki.ku.dk/%7Ejhjensen/h2odensity.hml>
> <http://propka.ki.ku.dk/%7Ejhjensen/h2odensity.hml>
> >> ).
> >>
> >> On my machine the contourlines are not filled, but on the webserver they
> >> are. I assume this is due to the fact that I use Jmol.jar on my machine
> and
> >> Jmol.js on the webpage.
> >>
> >> Futhermore Jmol.js seems to ignore "contourlines nofill" if I add that
> to
> >> the script.
> >>
> >> I am using Jmol 11.8.2.
> >>
> >> Any help is appreciated.
> >>
> >> Thanks, Jan
> >>
> >>
> >>
> >> The script that h2princ.xyz load looks like this:
> >>
> >> isosurface planex plane {0 0 0 0} contour 20 color absolute 0.002 0.05 "
> >>
> >>
> http://propka.ki.ku.dk/~jhjensen/h2oprinc.cube.gz<http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.cube.gz>
> <http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.cube.gz>
> >> "
> >> delay 3
> >> spin y 20
> >> delay 9
> >> spin off
> >> isosurface planey plane {1 0 0 0} contour 20 color absolute 0.002 0.05 "
> >>
> >>
> http://propka.ki.ku.dk/~jhjensen/h2oprinc.cube.gz<http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.cube.gz>
> <http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.cube.gz>
> >> "
> >> spin y 20
> >> delay 9
> >> spin off
> >> isosurface planez plane {0 1 0 0} contour 20 color absolute 0.002 0.05 "
> >>
> >>
> http://propka.ki.ku.dk/~jhjensen/h2oprinc.cube.gz<http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.cube.gz>
> <http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.cube.gz>
> >> "
> >> spin x 40
> >> delay 9
> >> spin off
> >> isosurface threed 0.002
> >>
> "http://propka.ki.ku.dk/~jhjensen/h2oprinc.cube.gz<http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.cube.gz>
> <http://propka.ki.ku.dk/%7Ejhjensen/h2oprinc.cube.gz>
> >> "
> >> color isosurface red ; color isosurface translucent 0.15
> >> spin y 20
> >> delay 9
> >> spin off
> >> color isosurface red ; color isosurface translucent 0.3
> >> select all; spacefill 100 %babel
> >> spin y 20
> >> delay 9
> >> spin off
> >>
> >>
> >>
>
> ------------------------------------------------------------------------------
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> >>
> >>
> >
> >
> > --
> > Robert M. Hanson
> > Professor of Chemistry
> > St. Olaf College
> > 1520 St. Olaf Ave.
> > Northfield, MN 55057
> > http://www.stolaf.edu/people/hansonr
> > phone: 507-786-3107
> >
> >
> > If nature does not answer first what we want,
> > it is better to take what answer we get.
> >
> > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
> >
>
> --------------------------------
>
>
> ------------------------------------------------------------------------------
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> > what you do best, core application coding. Discover what's new with
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>
> --------------------------------
> _______________________________________________
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> > https://lists.sourceforge.net/lists/listinfo/jmol-users
> >
>
>
>
>
>
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--
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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