Hello Francois- The communication between the JME structure drawing applet and Jmol is now very easy. In addition, Jmol will render these structures as 3D. Consequently, the 3D molfile of a 2D structure can be created. Two way communication is possible between JME and Jmol, but JME will render returned information as 2D. One nice feature of this is that structures can be exchanged by email as Web address query strings. We have an operational system at:
http://chemagic.com/web_molecules/script_page_large.aspx Click Display Molecular Editor, followed by the draw link. JME is very light weight and very widely used. Best Regards, Otis On 4/21/2010 2:09 PM, Francois Nguyen wrote: > Hi Angel. > > Thanks for the info. I have your book by the way! > > I am trying to make a web page with two applets: a jmol applet on one side > and a Symyx Jdraw applet on the other and have them transfer the data back > and forth. > > Extractmodel gives a MOL but it's not a CT file molfile. So Symyx Jdraw > applet will not understand it. > > fileContents will give me the CT file if that's what I set originally; but if > the data was set from an Xyz file, that's what I get back too, not a CT file. > > So it looks like jmol cannot be used as a converter between the various data > formats. > If rotations and translations will never affect the coordinates, as I always > care about the whole structure, not a subset, I may be able to enforce > starting from a CT-style Molfile. > > > jmolGetPropertyAsString is simplest when in javascript: > function getMolStringFromJmol() > { > return jmolGetPropertyAsString("fileContents"); > } > > -Francois > > > -----Original Message----- > From: Angel Herráez [mailto:angel.herr...@uah.es] > Sent: Wednesday, April 21, 2010 1:19 AM > To: jmol-users@lists.sourceforge.net > Subject: Re: [Jmol-users] what is the reverse operation of jmolLoadInline? > > Hello, Francois -- Otis Rothenberger chemagic.com ------------------------------------------------------------------------------ _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
