Wayne and Angel,

There's one more setting -- sheetSmoothing.

The three settings you need are

set bondModeOr TRUE   # default is FALSE
set traceAlpha TRUE      # default is TRUE
set sheetSmoothing 0     # default is 1.0

You can use this for any rendering option.
If you use backbone, you don't need to set sheetSmoothing or traceAlpha,
just bondModeOr.

Also --

set bondModeOr true

is the same as

set bondMode OR

it's just that you  can check the setting of bondModeOr, and you can't
check the setting of bondMode:

if (bondModeOr) {.....}


Bob

2011/12/14 Angel Herráez <[email protected]>

> Hello Wayne
>
> Yes, I know what you want.
> Without testing, a couple of hints:
>
> 1. This may be (or I may be wrong) what Eric Martz called "vines"
> style in Protein Explorer
>
> 2. Basically, the way to do it is
> set bondMode or;
> select sidechain;
> wireframe 0.3;
> select all;
> trace on; // or maybe cartoon on
>
> Try that and if you hit a hard wall I will try to specify more
>
>
>
> ------------------------------------------------------------------------------
> Cloud Computing - Latest Buzzword or a Glimpse of the Future?
> This paper surveys cloud computing today: What are the benefits?
> Why are businesses embracing it? What are its payoffs and pitfalls?
> http://www.accelacomm.com/jaw/sdnl/114/51425149/
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-- 
Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107


If nature does not answer first what we want,
it is better to take what answer we get.

-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
Cloud Computing - Latest Buzzword or a Glimpse of the Future?
This paper surveys cloud computing today: What are the benefits? 
Why are businesses embracing it? What are its payoffs and pitfalls?
http://www.accelacomm.com/jaw/sdnl/114/51425149/
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