On 29 Mar 2012, at 03:19, Craig T Martin wrote:

> Bob,
> 
>   I wouldn't be so dismissive of the iPad/iPhone revolution. Clearly the 
> latter looks to be dominating the smart phone market, despite it's higher 
> price tag. It wasn't that long ago that experts were dismissive of Apple 
> overall (or dismissive of mice and the GUI, for that matter). jmol risks 
> being left behind if it is not adapted to a platform with a growing user 
> base. I do appreciate that Apple's omitting Java support has made adapting 
> jmol very challenging, but I would love someone to rise to this challenge - 
> for my own and for jmol's sake.
> 
>   For those of you starting to use iPads in lecture, I do have some 
> colleagues at UMass who have an acceptable kludge, wherein they mirror their 
> laptops onto the iPad and then switch to that when they want to use jmol 
> structures (they can do everything else on the iPad and it is significantly 
> cheaper than the ThinkPads we used to use - not to mention a lot less buggy). 
> If anyone is interested, I can point them to my colleagues. But of course 
> this is not a general solution. 
> 
>   I don't yet have an iPad personally, but it's on my list of things to buy 
> next and I have a number of colleagues who are absolutely fanatical. Tomorrow 
> we go to the Dean to pitch an idea that will involve the purchase of 200 
> iPads, for laboratory and evening exam use. The latter would benefit greatly 
> from jmol adaptation.
> 
> Anyone game to take this on? Bringing jmol out of Java and into HTML5/OpenGL?

Someone else has already noted  GLMol,  
http://webglmol.sourceforge.jp/index-en.html  It is produced by Takanori Nakane 
(not sure if he reads this list) and I did not find it difficult to incorporate 
into an article (actually Peter Murray-Rust and I call these things datuments) 
I have just submitted to J Cheminformatics (ask me if you want a  "preprint"). 
OK, it does not actually yet display on an iPad (since for their own reasons 
Apple have not actually enabled it in IOS yet) but it is expected to as they 
say any day, as is  Android.

Takanori is currently working on implementing surfaces (and  I point out to him 
the wonderful  jvxl that  Bob has created); the list of other capabilities is 
also quite impressive. ChemDoodle web components too are impressive (as  I 
understand it, its core javascript functionality is open source) although a 
different model operates here (much of the advanced functionality is actually 
server side, and hence requires the user to have access to that server, and of 
course also be in online mode, ie it may eat up into any data plan you might 
have on eg your iPad).  My point is that these alternatives,  adopting as they 
do  HTML5 canvas and  WebGL,  are starting to appear. Whilst they are still 
years away from the functionality of  Jmol, they are going to increasingly  
make an impact.   

Let me give one example: if you are following  e-books you might appreciate the 
significance of the press release announcing that  ChemDoodle and  Inkling have 
partnered. I am convinced that "books" are now at the end of the induction 
period in evolutionary terms and they will now break out.  Jmol (to my 
knowledge) has not yet been incorporated into any  e-book (epub2, the current 
open format for these does not support scripting, but epub3, on which  Apple 
based their new ibooks, does), but  one can imagine that within a year there 
will be chemistry text books offering  Jmol-style interactivity. Given that the 
target device is Android/IOS, it seems  Jmol will not immediately feature in 
this revolution.   So  I agree with the statement above that Jmol risks being 
left behind.
------------------------------------------------------------------------------
This SF email is sponsosred by:
Try Windows Azure free for 90 days Click Here 
http://p.sf.net/sfu/sfd2d-msazure
_______________________________________________
Jmol-users mailing list
Jmol-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/jmol-users

Reply via email to