Hi Michael

> Kind of sad to have invisible atoms in Jmol.

Ha,  but it should only happen with one-atom molecules. There are not 
many of those ;-)

> In my previous attempt with "load data",  I used the first 21 ATOM lines 
> of my pdb file.
> Within the Jmol window, it does show the model with 21 atoms, 0 bonds.
> I could not seem to change their style and color them, by the menu or 
> explicit commands.

That's very strange.

> It changed the name of my model to "string" (second line) 

That's normal with inline models.

> How can I program the "Reload" ?   guessing Refresh or Reload did not work.

Reloading is done with the "load" command alone, without arguments. 
Not that it should be a solution, but since you found so...

There is a "refresh" command but that's to repaint/update the Jmol 
panel. For example, to force an echo to be displayed nefore other 
running commands finish.

·
 Dr. Angel Herráez
 Biochemistry and Molecular Biology,
 Dept. of Systems Biology, University of Alcalá
 E-28871 Alcalá de Henares  (Madrid), Spain


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