Otis,
I’m not using GoDaddy. My stuff is all hosted at Centre College. The
SpectralZoo and ReactionZoo are on a server by themselves, so sometimes weird
stuff happens to that server and ITS is less likely to find out about it
because most it’s off the beaten path.
Jennifer
Jennifer Muzyka
H.W. Stodghill Jr. and Adele H. Stodghill Professor of Chemistry
Centre College
600 West Walnut Street
Danville, KY 40422
jennifer.muz...@centre.edu<mailto:jennifer.muz...@centre.edu>
http://web.centre.edu/muzyka
http://organicers.org
859-238-5413
fax 859-236-7925
On Jun 13, 2016, at 10:59 AM, Otis Rothenberger
<osrot...@icloud.com<mailto:osrot...@icloud.com>> wrote:
Jennifer,
The page hangs for me on the first structure load, BUT if I wait it out, all is
OK. I missed this point in my initial check. All is well after this initial
load.
This initial hang, however, is repeated in some subsequent (no cache clearing)
new sessions. I don’t know that this is a problem, but it mirrors a behavior
that I’m seeing on my site now that I moved to GoDaddy. Since it’s not related
to local cache, I’ve been assuming that its related to the GoDaddy Name Server
DNS software. It’s irritating, but there’s not much I can do about it. I’m
spoiled because my site was on a high end service that I had to drop because of
cost/space limitations.
So I think I’m seeing this type of Name Server DNS software delay on your
page’s initial load on occasion. I just did not catch it at fist because I was
thinking that the page was already loaded. It was, but that load structure
button is loading a new page!
Are you using GoDaddy by any chance?
Otis
--
Otis Rothenberger
o...@chemagic.org<mailto:o...@chemagic.org>
http://chemagic.org
On Jun 13, 2016, at 10:18 AM, Otis Rothenberger
<osrot...@icloud.com<mailto:osrot...@icloud.com>> wrote:
Hi Jennifer,
I hate to be a "poop," but even with cache clearing this page is still not
working for me on Safari or Windows 10 Edge:
http://chemserv.centre.edu/muzyka/spectralzoo/jsmol/specZoo.php
Is this the page that you were referencing in your latest note?
Otis
--
Otis Rothenberger
o...@chemagic.org<mailto:o...@chemagic.org>
http://chemagic.org<http://chemagic.org/>
On Jun 13, 2016, at 9:11 AM, Jennifer L. Muzyka
<jennifer.muz...@centre.edu<mailto:jennifer.muz...@centre.edu>> wrote:
Thanks for Angel and Otis for helping me with the troubleshooting. After I
cleared my cache, it works for me too! I’m embarrassed to make such a silly
mistake.
Jennifer
Jennifer Muzyka
H.W. Stodghill Jr. and Adele H. Stodghill Professor of Chemistry
Centre College
600 West Walnut Street
Danville, KY 40422
jennifer.muz...@centre.edu<mailto:jennifer.muz...@centre.edu>
http://web.centre.edu/muzyka
http://organicers.org<http://organicers.org/>
859-238-5413
fax 859-236-7925
On Jun 11, 2016, at 6:08 AM, Angel Herráez
<angel.herr...@uah.es<mailto:angel.herr...@uah.es>> wrote:
Jennifer,
Your page
http://chemserv.centre.edu/muzyka/spectralzoo
is mostly functional for me (at least in Firefox Windows7).
1. JSpecViewer loads, and it loads spectra when I click on the buttons.
2. JSmol aldo loads, althoug it is hidden due to the css rule
#structure { display: none; }
3. The [Show Structure] button is not working because it sends data to a
structure.htm page that does not exist. I have made a local duplicate of your
page with the proper structure.htm file and it also works.
So I believe there is no problem due to upgrading your JSmol version, there is
no JmolScript problem, even Javascript problems.
You have most likely a mixed up collection of pieces of javascript code
inherited from previous page.
For example,
- you are calling jquery.js twice (at the top and the bottom of your page) --
in fact, three times counting the copy included in JSmol.min.js
- you are calling a mixture of JSmol-related js files, which are not needed as
Otis pointed out
- you are missing or have the wrong path to structure.htm
This is my advice:
(head section) Leave just these:
<script type="text/javascript" src="jquery/jquery.js"></script>
<script type="text/javascript" src="JSmol.min.nojq.js"></script>
<script type="text/javascript" src="js/JSmolJSV.js"></script>
(bottom of body) Remove this line:
<script src="../../reactionzoo/fluid_files/jquery.js"></script>
Optionally:
You can probably remove the jmol_isReady part, and clean up your Info
definitions to these:
Info = {
width: 800,
height: 300,
color: "#FFFFFF",
serverURL: "http://chemapps.stolaf.edu/jmol/jsmol/php/jsmol.php";,
disableInitialConsole: true,
use: "HTML5"
}
var Info2 = {
width: 200,
height: 200,
serverURL: "http://chemapps.stolaf.edu/jmol/jsmol/jsmol.php";,
use: "HTML5",
j2sPath: "j2s"
}
Although not important for your setup, this is the correct function, just in
case:
function cloneJSmol(JSmolObject) {
var t = JSmolObject._jmolType; //temp
if ( /_Canvas2D/.test(t) ) { t = 'HTML5'; }
else if ( /_Canvas3D/.test(t) ) { t = 'WebGL'; }
else if ( /_Applet/.test(t) ) { t = 'Java'; }
else { t = null; }
JSmolCloneData.type = t;
JSmolCloneData.state = Jmol.getPropertyAsString(JSmolObject, 'stateInfo');
window.open(' structure.htm','JSmolPopup','resizable, width=500, height=500');
}
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