Thanks for confirming that Angel,
I've found several other molecules that don't seem to export properly with
JSmol 14.3.12_2015.01.28 or Bob's demo page: 4ESV, 3UX4, 1JZ8,2D1S, 1GFL.
All of them give the 'Download Failed - Network' error.
What is really odd is that I have been able to get proper x3d files from
2D1S, 1GFL with JSmol 14.3.12_2015.01.28 using the javascript command :
Jmol.evaluateVar(jmolApplet4857_0,'write("X3D")'); but this doesn't seem to
work for 4ESV, 3UX4, 1JZ8, 3UX4
Chris
On 27 June 2016 at 10:02, Chris St Pourcain <
[email protected]> wrote:
> Angel,
>
> Thanks again for looking at this. I thought I'd add to the mystery!
>
> I've discovered that if I load 1HHO and then do file->export->Export X3D
> 3D model from the menu this works fine for JSmol 14.3.12_2015.01.28 (Jim
> Hu's Wordpress plugin https://wordpress.org/plugins/jsmol2wp/) and for
> Bob's demo page(http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm).
>
> But if I repeat the process using 1EQZ instead I get 'Download Failed -
> Network' error. I'm using the Chrome browser and Windows 10.
>
> This isn't anything to do with cartoonfancy as all I did was import the
> molecule and then immediately try and export it.
>
> Cheers
>
> Chris
>
>
>
> On 26 June 2016 at 11:36, Angel Herráez <[email protected]> wrote:
>
>> Hi Chris
>>
>> All the ways you mention should be equivalent, since in the end they run
>> the
>> same command.
>> From your description, this is a bug in the newer version(s) of Jmol. For
>> whatever reason it seems to appear only for certain models.
>>
>> I cannot help with that, but Bob will surely track it down.
>>
>> In several tests I also obtained empty results but by random combinations
>> I've had success a couple of times in producing x3d from this model.
>> Curiously, on these successful occasions, after export the displayed model
>> just shows one chain (that in reddish color, ie chain H) This might be
>> related
>> to the bug.
>> Jmol application 14.6.0_2016.05.17
>>
>> Also, note that while I did not apply cartoonfancy, the x3d product looks
>> similar so maybe that setting is not needed for x3d export.
>> Please see attached* state and x3d. The commands in this case were
>>
>> initialize
>> load =1EQZ
>> delete not protein
>> cartoon only
>> color chain
>>
>> then exported from popup menu
>>
>>
>> (*) too big to attach here. You can get it from
>> https://drive.google.com/open?id=0B-Kpcv-31q6gLU5JSVhfV05IMTg
>>
>>
>
>
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