Might also need to modify Base.LOAD_CACHE_PATH ?
On Thursday, June 16, 2016 at 5:30:32 AM UTC-7, Tomas Mikoviny wrote:
>
> I'm running Julia v0.4.5 on the server (via SSH).
>
> julia> versioninfo()
> Julia Version 0.4.5
> Commit 2ac304d (2016-03-18 00:58 UTC)
> Platform Info:
> System: Linux (x86_64-unknown-linux-gnu)
> CPU: Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz
> WORD_SIZE: 64
> BLAS: libopenblas (USE64BITINT DYNAMIC_ARCH NO_AFFINITY Sandybridge)
> LAPACK: libopenblas64_
> LIBM: libopenlibm
> LLVM: libLLVM-3.3
>
> I've changed the the JULIA_PKGDIR parameter from initial
>
> julia> ENV["JULIA_PKGDIR"]
> "/cluster/software/VERSIONS/julia/0.4.5/share/julia/site/"
>
> to following via .juliarc.jl
>
> julia> ENV["JULIA_PKGDIR"]
> "/usit/abel/u1/tomasmi/nobackup/.julia/"
>
> to be able to install the packages to directory I can fully access.
> Adding package works flawlessly (starting with clean plate):
>
> julia> Pkg.init()
> INFO: Initializing package repository /usit/abel/u1/tomasmi/nobackup/.
> julia/v0.4
> INFO: Cloning METADATA from git://github.com/JuliaLang/METADATA.jl
>
> julia> Pkg.add("DataFrames")
> INFO: Cloning cache of ArrayViews from git://
> github.com/JuliaLang/ArrayViews.jl.git
> INFO: Cloning cache of Compat from git://
> github.com/JuliaLang/Compat.jl.git
> INFO: Cloning cache of DataArrays from git://
> github.com/JuliaStats/DataArrays.jl.git
> INFO: Cloning cache of DataFrames from git://
> github.com/JuliaStats/DataFrames.jl.git
> INFO: Cloning cache of Docile from git://
> github.com/MichaelHatherly/Docile.jl.git
> INFO: Cloning cache of GZip from git://github.com/JuliaLang/GZip.jl.git
> INFO: Cloning cache of Reexport from git://
> github.com/simonster/Reexport.jl.git
> INFO: Cloning cache of SortingAlgorithms from git://
> github.com/JuliaLang/SortingAlgorithms.jl.git
> INFO: Cloning cache of StatsBase from git://
> github.com/JuliaStats/StatsBase.jl.git
> INFO: Cloning cache of StatsFuns from git://
> github.com/JuliaStats/StatsFuns.jl.git
> INFO: Installing ArrayViews v0.6.4
> INFO: Installing Compat v0.7.20
> INFO: Installing DataArrays v0.3.3
> INFO: Installing DataFrames v0.7.3
> INFO: Installing Docile v0.5.23
> INFO: Installing GZip v0.2.19
> INFO: Installing Reexport v0.0.3
> INFO: Installing SortingAlgorithms v0.0.6
> INFO: Installing StatsBase v0.8.2
> INFO: Installing StatsFuns v0.2.2
> INFO: Package database updated
>
> Nevertheless I hit the wall the moment I want to use the package:
>
> julia> using DataFrames
> INFO: Precompiling module DataFrames...
> INFO: Recompiling stale cache file /cluster/software/VERSIONS/julia/0.4.5/
> share/julia/site/lib/v0.4/Compat.ji for module Compat.
> ERROR: LoadError: unlink: permission denied (EACCES)
> in unlink at fs.jl:102
> in rm at file.jl:59
> in create_expr_cache at loading.jl:346
> in compilecache at loading.jl:399
> in recompile_stale at loading.jl:476
> in _require_from_serialized at loading.jl:83
> in _require_from_serialized at ./loading.jl:109
> in require at ./loading.jl:235
> in include at ./boot.jl:261
> in include_from_node1 at ./loading.jl:320
> [inlined code] from none:2
> in anonymous at no file:0
> in process_options at ./client.jl:257
> in _start at ./client.jl:378
> while loading /usit/abel/u1/tomasmi/nobackup/.julia/v0.4/DataFrames/src/
> DataFrames.jl, in expression starting on line 11
> ERROR: Failed to precompile DataFrames to /cluster/software/VERSIONS/julia
> /0.4.5/share/julia/site/lib/v0.4/DataFrames.ji
> in error at ./error.jl:21
> in compilecache at loading.jl:400
> in require at ./loading.jl:266
>
> Recompilation tries to reach server side installed package even though I
> have it in my JULIA_PKGDIR.
> What did I miss or what do I have to change in ENV to get this work?
>
> Thanks!
>
