Ok, I seem to see what is the problem, but I have no clue how to solve it.

Search does not work anymore in Mail.

None of my flags are matched (except for sorting "by flag" in one mailbox 
window) and all the smartboxes remain empty.

I think that's what triggered my rebuilding the boxes yesterday which 
eventually resulted in removing all the data I had there.

Ok, so now I have restore everything, the mails are here, but Mail search in 
all aspects of search in Mail is dead.

Any idea how to get that back ?

Jean-Christophe Helary 

> On Oct 27, 2015, at 18:00, Macs R We <[email protected]> wrote:
> 
> Is your account IMAP or POP?  If IMAP, you're just spinning your wheels 
> trying to rebuild it, because it's not on your machine, it's on your ISP.  
> Just set it up properly and it will magically reappear.
> 
>> On Oct 27, 2015, at 1:54 AM, Jean-Christophe Helary 
>> <[email protected]> wrote:
>> 
>> 
>> I'm on El Capitan and I've noticed that Mail did not behave properly for a 
>> little while. It would crash at startup, it would not display the contents 
>> for mailboxes (standard or "smart") if would not handle filters on flags etc.
>> 
>> So last night I tried to rebuild my inbox. Then I dumped the Envelope and 
>> reimported everything, I did that twice because it was not working properly 
>> and they I realised that my main (work) account had all its mails erased.
>> 
>> I checked the contents of ~/Library/Mail/V3 etc and indeed, my inbox (but 
>> not the sent/drafts etc) was empty.
>> 
>> No panic, I have a Time Capsule backup so I just restored the inbox, 
>> reimported everything but even though I had close to 2GB in data *before* 
>> the import, at then end I was left again with an empty inbox.
>> 
>> What has to be done to properly restore that inbox and get it properly 
>> imported ?
>> 
>> Jean-Christophe Helary 
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> 
> -- 
>  Macs R We -- Personal Macintosh Service and Support
>    in the Wickenburg and far Northwest Valley Areas.
>                            http://macsrwe.com
> 
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