I downloaded Mauve 2.40 and while trying to perform the alignment for
two mammalian bat genomes, encountered the following error. Since I am
new to this whole thing, I request assistance in this regard.
rying path /home/mku/Downloads/mauve_2.4.0/linux-x64/mauveAligner
Running alignment.
Executing
/home/mku/Downloads/mauve_2.4.0/linux-x64/mauveAligner
--output=/media/New Volume_/mauvee
--island-size=50
--island-output=/media/New Volume_/mauvee.islands
--backbone-size=50
--max-backbone-gap=50
--backbone-output=/media/New Volume_/mauvee.backbone
--id-matrix=/media/New Volume_/mauvee.id_matrix
--output-alignment=/media/New Volume_/mauvee.alignment
--output-guide-tree=/media/New Volume_/mauvee.guide_tree
/media/SWETHA/My Project!/Sequences/M.brandtii/Mbrandtii rna.gbk
/media/SWETHA/My Project!/Sequences/M.brandtii/Mbrandtii rna.gbk.sslist
/media/SWETHA/My Project!/Sequences/P.alecto/Palecto rna.gbk
/media/SWETHA/My Project!/Sequences/P.alecto/Palecto rna.gbk.sslist
/home/mku/Downloads/mauve_2.4.0/linux-x64/mauveAligner: 1: Syntax
error: "(" unexpected
Exited with error code: 2
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