Hi Caspar,
you understood perfectly. I tried to use the MITK plugin gererator,
executing the example line:
$ ./MITKPluginGenerator --plugin-symbolic-name prova.myplugin --view-name
"MyView" --project-name "MyProject"
It generates the folder with the CMakeList.txt.
$ ccmake . -- runs withour errors
but when I run make it gives this error
$make
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
CMake Error at MITK-superbuild/CTK-src/CMake/ctkMacroSetupPlugins.cmake:144
(message):
The following plug-ins are using invalid symbolic names: prova.myplugin
Call Stack (most recent call first):
CMakeLists.txt:345 (ctkMacroSetupPlugins)
Any ideas?
Thanks a lot!
On 30 October 2013 11:46, Goch, Caspar Jonas <[email protected]>wrote:
> Hi Madda,****
>
> ** **
>
> I want to make sure I understand your setup:****
>
> ** **
>
> **1. **You have build MITK from source using the MIT superbuild
> mechanism and default settings (No externally build toolkits but Qt)****
>
> **2. **You want to create your own project using MITK (and by
> extension ITK) as a toolkit****
>
> **3. **You have created your own project by hand (as in, wrote all
> the CMake files yourself)****
>
> ** **
>
> If this is your setup and you are experiencing problems regarding include
> paths you might want to consider using the MITK Plugin Generator to create
> a project for yourself [1]. This will automatically setup a working
> directory for you with the appropriate CMake files. ****
>
> If you are trying to modify an existing project to use MITK this will be
> more work, but even in that case taking a look at the generated files might
> help you adapt your own.****
>
> ** **
>
> Did I understand your problem correctly?****
>
> ** **
>
> Best,****
>
> Caspar****
>
> ** **
>
> [1] http://docs.mitk.org/nightly-qt4/HowToNewProject.html****
>
> ** **
>
> *Von:* Madda [mailto:[email protected]]
> *Gesendet:* Mittwoch, 30. Oktober 2013 11:53
> *An:* [email protected]
> *Betreff:* [mitk-users] Linking problems****
>
> ** **
>
>
> ****
>
> Hello,****
>
> I am new to MITK. I successfully installed them and now I am trying to
> compile a very simple cxx file. I am also using the ITK libraries and since
> I had the ITK4 already installed for other projects I am linking to the ITK
> version installed by MITK. ****
>
> This is .cxx file (the ITK parts are excluded):
>
> //---------------------------------------
>
> #include "mitkPicFileReader.h"
>
> static const unsigned int ImageDimension = 3;
> typedef mitk::PicFileReader PicReaderType;
>
> int main( int argc, char ** argv ) {
> PicReaderType::Pointer r = PicReaderType::New();
> char* name;
> r->SetFileName(name);//a_inputFileName());
> r->Update();
> return EXIT_SUCCESS;
> }
>
> //----------------------------------------****
>
> ** **
>
> This is my CMakeList.txt:
>
>
> #---------------------------------------------------------------------------------------------
>
> # include itk
> SET(ITK_DIR /home/strumia/Programs/MITK/MITK-superbuild/ITK-build/)
> FIND_PACKAGE(ITK)
> IF(ITK_FOUND)
> MESSAGE ('ITK_USE_FILE' ${ITK_USE_FILE} )
> INCLUDE(${ITK_USE_FILE})
> ELSE(ITK_FOUND)
> MESSAGE(FATAL_ERROR "ITK not found. Please set ITK_DIR.")
> ENDIF(ITK_FOUND)****
>
>
> # include mitk
> SET (MITK_DIR /home/strumia/Programs/MITK/MITK-superbuild/MITK-build)
> FIND_PACKAGE(MITK REQUIRED)
> IF(MITK_FOUND)
> INCLUDE_DIRECTORIES(${MITK_INCLUDE_DIRS})
> ELSE(MITK_FOUND)
> MESSAGE(FATAL_ERROR "MITK not found. Please set MITK_DIR.")
> ENDIF(MITK_FOUND)
>
>
> LINK_DIRECTORIES(${MITK_LINK_DIRECTORIES})
>
> ADD_EXECUTABLE(PicReadWrite PicReadWrite.cxx)
> TARGET_LINK_LIBRARIES(PicReadWrite ${ITK_LIBRARIES} ${MITK_LIBRARIES})
>
>
> #---------------------------------------------------------------------------------------------
> ****
>
> I have two problems:****
>
> 1. If I do cmake . with this CMakeList.txt it will not find the mitk .cpp
> files; for example it gives me this error ****
>
> ** **
>
> In file included from
> /home/strumia/Desktop/prova_link_MITK/PicReadWrite.cxx:3:0:
> /home/strumia/Programs/MITK/MITK-2012.09.0-src/Modules/IpPicSupport/mitkPicFileReader.h:26:32:
> fatal error: mitkLegacyAdaptors.h: No such file or directory
>
> ****
>
> 2. To solve this I add to include manually all the directories. ****
>
> The CmakeList.txt becomes:
>
>
> #---------------------------------------------------------------------------------------------
>
> # include itk
> SET(ITK_DIR /home/strumia/Programs/MITK/MITK-superbuild/ITK-build/)
> FIND_PACKAGE(ITK)
> IF(ITK_FOUND)
> MESSAGE ('ITK_USE_FILE' ${ITK_USE_FILE} )
> INCLUDE(${ITK_USE_FILE})
> ELSE(ITK_FOUND)
> MESSAGE(FATAL_ERROR "ITK not found. Please set ITK_DIR.")
> ENDIF(ITK_FOUND)
>
> # include mitk
> SET (MITK_DIR /home/strumia/Programs/MITK/MITK-superbuild/MITK-build)
> FIND_PACKAGE(MITK REQUIRED)
> IF(MITK_FOUND)
> INCLUDE_DIRECTORIES(${MITK_INCLUDE_DIRS})
> ELSE(MITK_FOUND)
> MESSAGE(FATAL_ERROR "MITK not found. Please set MITK_DIR.")
> ENDIF(MITK_FOUND)
>
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Modules/IpPicSupport)
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Modules/LegacyAdaptors)
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-superbuild/MITK-build/modulesConf)
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-superbuild/MITK-build)
>
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/IO)
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Common;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/DataManagement;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Algorithms;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Rendering;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Interactions;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Controllers;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Service)
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Utilities/tinyxml;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Utilities/mbilog;/home/strumia/Programs/MITK/MITK-superbuild/MITK-build/Utilities/mbilog)
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Utilities/ipPic;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Utilities)
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Code/Common;/home/strumia/Programs/MITK/MITK-superbuild/ITK-build;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl)
>
> INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-superbuild/ITK-build/Utilities/vxl/vcl;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/core/vnl;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/core;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl/config.win32/vc60;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl/config.win32;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl/config.win32/vc70;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl/config.stlport.win32-vc60;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/core)
> ****
>
>
>
>
> LINK_DIRECTORIES(${MITK_LINK_DIRECTORIES})
>
> ADD_EXECUTABLE(PicReadWrite PicReadWrite.cxx)
> TARGET_LINK_LIBRARIES(PicReadWrite ${ITK_LIBRARIES} ${MITK_LIBRARIES})
>
>
> #---------------------------------------------------------------------------------------------
> ****
>
> In this case is able to find the mitk .cpp files, but is giving linking
> problems:
>
> $make
> Linking CXX executable PicReadWrite
> CMakeFiles/PicReadWrite.dir/PicReadWrite.cxx.o: In function
> `mitk::PicFileReader::New()':
> PicReadWrite.cxx:(.text._ZN4mitk13PicFileReader3NewEv[mitk::PicFileReader::New()]+0x42):
> undefined reference to `mitk::PicFileReader::PicFileReader()'
> CMakeFiles/PicReadWrite.dir/PicReadWrite.cxx.o: In function
> `itk::ObjectFactory<mitk::PicFileReader>::Create()':
> PicReadWrite.cxx:(.text._ZN3itk13ObjectFactoryIN4mitk13PicFileReaderEE6CreateEv[itk::ObjectFactory<mitk::PicFileReader>::Create()]+0xe):
> undefined reference to `typeinfo for mitk::PicFileReader'
> PicReadWrite.cxx:(.text._ZN3itk13ObjectFactoryIN4mitk13PicFileReaderEE6CreateEv[itk::ObjectFactory<mitk::PicFileReader>::Create()]+0x47):
> undefined reference to `typeinfo for mitk::PicFileReader'
> collect2: ld returned 1 exit status
> make[2]: *** [PicReadWrite] Error 1
> make[1]: *** [CMakeFiles/PicReadWrite.dir/all] Error 2
> make: *** [all] Error 2
>
> ****
>
> Can you please help me?****
>
> Thanks,
> ****
>
>
>
> --
> -Madda- ****
>
>
> --
> -Madda- ****
>
--
-Madda-
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