Hi,
it looks like you discovered a limitation / bug in the PluginGenerator.
Please try again and use at least three sections for your plugin
symbolic-name. For example:
$ ./MITKPluginGenerator --plugin-symbolic-name com.prova.myplugin
--view-name "MyView" --project-name "MyProject"
We will either fix the bug or update the documentation.
Thanks,
Sascha
On 10/30/2013 06:26 PM, Madda wrote:
Hi Caspar,
you understood perfectly. I tried to use the MITK plugin gererator,
executing the example line:
$ ./MITKPluginGenerator --plugin-symbolic-name prova.myplugin
--view-name "MyView" --project-name "MyProject"
It generates the folder with the CMakeList.txt.
$ ccmake . -- runs withour errors
but when I run make it gives this error
$make
-- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
CMake Error at
MITK-superbuild/CTK-src/CMake/ctkMacroSetupPlugins.cmake:144 (message):
The following plug-ins are using invalid symbolic names: prova.myplugin
Call Stack (most recent call first):
CMakeLists.txt:345 (ctkMacroSetupPlugins)
Any ideas?
Thanks a lot!
On 30 October 2013 11:46, Goch, Caspar Jonas
<[email protected] <mailto:[email protected]>> wrote:
Hi Madda,
I want to make sure I understand your setup:
1.You have build MITK from source using the MIT superbuild
mechanism and default settings (No externally build toolkits but Qt)
2.You want to create your own project using MITK (and by extension
ITK) as a toolkit
3.You have created your own project by hand (as in, wrote all the
CMake files yourself)
If this is your setup and you are experiencing problems regarding
include paths you might want to consider using the MITK Plugin
Generator to create a project for yourself [1]. This will
automatically setup a working directory for you with the
appropriate CMake files.
If you are trying to modify an existing project to use MITK this
will be more work, but even in that case taking a look at the
generated files might help you adapt your own.
Did I understand your problem correctly?
Best,
Caspar
[1]http://docs.mitk.org/nightly-qt4/HowToNewProject.html
*Von:*Madda [mailto:[email protected] <mailto:[email protected]>]
*Gesendet:* Mittwoch, 30. Oktober 2013 11:53
*An:* [email protected]
<mailto:[email protected]>
*Betreff:* [mitk-users] Linking problems
Hello,
I am new to MITK. I successfully installed them and now I am
trying to compile a very simple cxx file. I am also using the ITK
libraries and since I had the ITK4 already installed for other
projects I am linking to the ITK version installed by MITK.
This is .cxx file (the ITK parts are excluded):
//---------------------------------------
#include "mitkPicFileReader.h"
static const unsigned int ImageDimension = 3;
typedef mitk::PicFileReader PicReaderType;
int main( int argc, char ** argv ) {
PicReaderType::Pointer r = PicReaderType::New();
char* name;
r->SetFileName(name);//a_inputFileName());
r->Update();
return EXIT_SUCCESS;
}
//----------------------------------------
This is my CMakeList.txt:
#---------------------------------------------------------------------------------------------
# include itk
SET(ITK_DIR /home/strumia/Programs/MITK/MITK-superbuild/ITK-build/)
FIND_PACKAGE(ITK)
IF(ITK_FOUND)
MESSAGE ('ITK_USE_FILE' ${ITK_USE_FILE} )
INCLUDE(${ITK_USE_FILE})
ELSE(ITK_FOUND)
MESSAGE(FATAL_ERROR "ITK not found. Please set ITK_DIR.")
ENDIF(ITK_FOUND)
# include mitk
SET (MITK_DIR /home/strumia/Programs/MITK/MITK-superbuild/MITK-build)
FIND_PACKAGE(MITK REQUIRED)
IF(MITK_FOUND)
INCLUDE_DIRECTORIES(${MITK_INCLUDE_DIRS})
ELSE(MITK_FOUND)
MESSAGE(FATAL_ERROR "MITK not found. Please set MITK_DIR.")
ENDIF(MITK_FOUND)
LINK_DIRECTORIES(${MITK_LINK_DIRECTORIES})
ADD_EXECUTABLE(PicReadWrite PicReadWrite.cxx)
TARGET_LINK_LIBRARIES(PicReadWrite ${ITK_LIBRARIES} ${MITK_LIBRARIES})
#---------------------------------------------------------------------------------------------
I have two problems:
1. If I do cmake . with this CMakeList.txt it will not find the
mitk .cpp files; for example it gives me this error
In file included from
/home/strumia/Desktop/prova_link_MITK/PicReadWrite.cxx:3:0:
/home/strumia/Programs/MITK/MITK-2012.09.0-src/Modules/IpPicSupport/mitkPicFileReader.h:26:32:
fatal error: mitkLegacyAdaptors.h: No such file or directory
2. To solve this I add to include manually all the directories.
The CmakeList.txt becomes:
#---------------------------------------------------------------------------------------------
# include itk
SET(ITK_DIR /home/strumia/Programs/MITK/MITK-superbuild/ITK-build/)
FIND_PACKAGE(ITK)
IF(ITK_FOUND)
MESSAGE ('ITK_USE_FILE' ${ITK_USE_FILE} )
INCLUDE(${ITK_USE_FILE})
ELSE(ITK_FOUND)
MESSAGE(FATAL_ERROR "ITK not found. Please set ITK_DIR.")
ENDIF(ITK_FOUND)
# include mitk
SET (MITK_DIR /home/strumia/Programs/MITK/MITK-superbuild/MITK-build)
FIND_PACKAGE(MITK REQUIRED)
IF(MITK_FOUND)
INCLUDE_DIRECTORIES(${MITK_INCLUDE_DIRS})
ELSE(MITK_FOUND)
MESSAGE(FATAL_ERROR "MITK not found. Please set MITK_DIR.")
ENDIF(MITK_FOUND)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Modules/IpPicSupport)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Modules/LegacyAdaptors)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-superbuild/MITK-build/modulesConf)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-superbuild/MITK-build)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/IO)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Common;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/DataManagement;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Algorithms;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Rendering;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Interactions;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Controllers;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Core/Code/Service)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Utilities/tinyxml;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Utilities/mbilog;/home/strumia/Programs/MITK/MITK-superbuild/MITK-build/Utilities/mbilog)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-2012.09.0-src/Utilities/ipPic;/home/strumia/Programs/MITK/MITK-2012.09.0-src/Utilities)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Code/Common;/home/strumia/Programs/MITK/MITK-superbuild/ITK-build;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl)
INCLUDE_DIRECTORIES(/home/strumia/Programs/MITK/MITK-superbuild/ITK-build/Utilities/vxl/vcl;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/core/vnl;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/core;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl/config.win32/vc60;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl/config.win32;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl/config.win32/vc70;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/vcl/config.stlport.win32-vc60;/home/strumia/Programs/MITK/MITK-superbuild/ITK-src/Utilities/vxl/core)
LINK_DIRECTORIES(${MITK_LINK_DIRECTORIES})
ADD_EXECUTABLE(PicReadWrite PicReadWrite.cxx)
TARGET_LINK_LIBRARIES(PicReadWrite ${ITK_LIBRARIES} ${MITK_LIBRARIES})
#---------------------------------------------------------------------------------------------
In this case is able to find the mitk .cpp files, but is giving
linking problems:
$make
Linking CXX executable PicReadWrite
CMakeFiles/PicReadWrite.dir/PicReadWrite.cxx.o: In function
`mitk::PicFileReader::New()':
PicReadWrite.cxx:(.text._ZN4mitk13PicFileReader3NewEv[mitk::PicFileReader::New()]+0x42):
undefined reference to `mitk::PicFileReader::PicFileReader()'
CMakeFiles/PicReadWrite.dir/PicReadWrite.cxx.o: In function
`itk::ObjectFactory<mitk::PicFileReader>::Create()':
PicReadWrite.cxx:(.text._ZN3itk13ObjectFactoryIN4mitk13PicFileReaderEE6CreateEv[itk::ObjectFactory<mitk::PicFileReader>::Create()]+0xe):
undefined reference to `typeinfo for mitk::PicFileReader'
PicReadWrite.cxx:(.text._ZN3itk13ObjectFactoryIN4mitk13PicFileReaderEE6CreateEv[itk::ObjectFactory<mitk::PicFileReader>::Create()]+0x47):
undefined reference to `typeinfo for mitk::PicFileReader'
collect2: ld returned 1 exit status
make[2]: *** [PicReadWrite] Error 1
make[1]: *** [CMakeFiles/PicReadWrite.dir/all] Error 2
make: *** [all] Error 2
Can you please help me?
Thanks,
--
-Madda-
--
-Madda-
--
-Madda-
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