I think I understand part of the cause of this issue but I am not sure of 
the solution.

cPanel has the following VirtualHosts

 <VirtualHost 107.161.18.131:80>
    ServerName 107.161.18.131
    ...
 <VirtualHost *>
    ServerName <Server Host Name>
    ...
 <VirtualHost 107.161.18.131:80>
    ServerName fina.dev.harwoodspike.com
    ...

So after much playing around I have found that if I remove the <VirtualHost 
*> entry then the logging issue goes away.
I am not sure what the logging mechanism has to do with the Virtual Hosts.
Also I noticed that the global ErrorLog is set at compile time to 
"logs/error_log".

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