Hi Karl, I would highly recommend Momocs. You can read in the images into R with the import_jpeg function. The author has a lot of documentation on his website and on github.
Ricardo On Mon, Feb 16, 2015 at 2:04 PM, Garvin, Heather <[email protected]> wrote: > Hi Karl, > > > > I’ve used the Shape software package to complete EFA before, and it worked > very well. You can find the files to download on the SB Morphometrics > website (http://life.bio.sunysb.edu/morph/soft-outlines.html) > > > > Along with the download is a manual and tutorial – it’s very easy to > follow and simple to use. If you have 2D images you’re using it’s > particularly useful, as you can just upload the picture files and the > software will allow you to binarize it and will analyze the outlines right > from the image. > > > > Hope that helps, > > --Heather > > > > ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ ~ > > *Heather M. Garvin, PhD* > > *Assistant Professor of Anthropology* > > *Dept of Applied Forensic Sciences* > > *Dept of Anthropology/Archaeology* > > *Mercyhurst University* > > *Zurn 69* > > *(814)824-3953 <%28814%29824-3953>* > > > > ****************************** > PRIVILEGED AND CONFIDENTIAL: This message and all attachments may include > information that is privileged and confidential. If you are not the > intended recipient, you may not use, copy, distribute or disclose the > information contained in or attached to this message. If you have received > this message in error, please advise the sender at the Mercyhurst Forensic > Anthropology Laboratory immediately by replying to this email, and then > delete it from your system. Thank you. > > > > > > > > *From:* Karl Fetter [mailto:[email protected]] > *Sent:* Sunday, February 15, 2015 3:53 PM > *To:* [email protected] > *Subject:* [MORPHMET] Go-to Program of Elliptical Fourier Analysis > > > > Hi Everyone, > > > > I'd like to find out what the 'go-to' program is for collecting elliptical > fourier descriptors? Is there a favorite? I like to analyze data in R, are > there programs that are easier to integrate into R than others? > > > > I see that the R package Momocs has a lot of tools for analyzing EFA data, > but can one also collect data with Momocs? > > > > I'm pretty familiar with Landmark GMM workflows, is the EFA workflow > similar in concept? I.e., image a leaf, collect the data (with some > program), do some kind of superimposition, work with the data. > > > > Thanks for the tips, > > > > Karl Fetter > > UVM - Plant Biology > > -- > MORPHMET may be accessed via its webpage at http://www.morphometrics.org > > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > > -- > MORPHMET may be accessed via its webpage at http://www.morphometrics.org > > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > -- Ricardo Kriebel, Ph.D. Research Associate University of Wisconsin-Madison Department of Botany 430 Lincoln Drive Madison, WI 53706 -- MORPHMET may be accessed via its webpage at http://www.morphometrics.org To unsubscribe from this group and stop receiving emails from it, send an email to [email protected].
