Hi Tomas, I have installed mzmine 2.1 on windows 7 64 bit with Java 6 and Java 3D installed. I have verified that Java 3D works by visiting the java 3d test page at wwww.downloadjava3d.com/java3dtest.php and indeed I do see a 3D spinning image. (The hardware is an Intel Xeon 8 core processor with an ATI FirePro V5700 Graphics card).
However when I load mass spectral data and click on "Visualisation / 3D plot
nothing happens. The 2D and TIC plots all work fine.
The Java console error message is listed below
Any thoughts?
Many thanks
Mark
[18:43:20|FINEST|ThreeDVisualizer]: Opening a new 3D visualizer setup dialog
Exception in thread "AWT-EventQueue-0" java.lang.NoClassDefFoundError: javax/med
ia/j3d/GeometryArray
at net.sf.mzmine.modules.visualization.threed.ThreeDVisualizerWindow.<in
it>(ThreeDVisualizerWindow.java:107)
at net.sf.mzmine.modules.visualization.threed.ThreeDVisualizer.show3DVis
ualizerSetupDialog(ThreeDVisualizer.java:152)
at net.sf.mzmine.modules.visualization.threed.ThreeDVisualizer.show3DVis
ualizerSetupDialog(ThreeDVisualizer.java:111)
at net.sf.mzmine.modules.visualization.threed.ThreeDVisualizer.actionPer
formed(ThreeDVisualizer.java:85)
at javax.swing.AbstractButton.fireActionPerformed(Unknown Source)
at javax.swing.AbstractButton$Handler.actionPerformed(Unknown Source)
at javax.swing.DefaultButtonModel.fireActionPerformed(Unknown Source)
at javax.swing.DefaultButtonModel.setPressed(Unknown Source)
at javax.swing.AbstractButton.doClick(Unknown Source)
at javax.swing.plaf.basic.BasicMenuItemUI.doClick(Unknown Source)
at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(Unknown
Source)
at java.awt.AWTEventMulticaster.mouseReleased(Unknown Source)
at java.awt.Component.processMouseEvent(Unknown Source)
at javax.swing.JComponent.processMouseEvent(Unknown Source)
at java.awt.Component.processEvent(Unknown Source)
at java.awt.Container.processEvent(Unknown Source)
at java.awt.Component.dispatchEventImpl(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.LightweightDispatcher.retargetMouseEvent(Unknown Source)
at java.awt.LightweightDispatcher.processMouseEvent(Unknown Source)
at java.awt.LightweightDispatcher.dispatchEvent(Unknown Source)
at java.awt.Container.dispatchEventImpl(Unknown Source)
at java.awt.Window.dispatchEventImpl(Unknown Source)
at java.awt.Component.dispatchEvent(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
Caused by: java.lang.ClassNotFoundException: javax.media.j3d.GeometryArray
at java.net.URLClassLoader$1.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(Unknown Source)
at java.lang.ClassLoader.loadClass(Unknown Source)
at sun.misc.Launcher$AppClassLoader.loadClass(Unknown Source)
at java.lang.ClassLoader.loadClass(Unknown Source)
... 32 more
-- -----------------------------------------
Mark Earll
Research Leader - Metabolomics
Analytical Sciences (Office 102/65)
[cid:[email protected]]
Jealott's Hill International Research Centre
Bracknell
Berkshire
RG42 6EY
United Kingdom
Direct +44 1344 414316
[email protected]<mailto:[email protected]>
www.syngenta.com<http://www.syngenta.com/>
message may contain confidential information. If you are not the designated
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