Hello, Our software exports mzML 1.1 and the most recent version of MZmine 2.2 can open the files but it doesn't seem to read the retention time.
The specific mzML includes local retention time and elution time CV elements but these don't show up. See terms below and attached mzML for an example. Can anyone give me an idea what we need to include in our mzML so MZmine will display the retention time? I hope I'm sending this to the write place and apologize if I'm not. Thank you, Steven Robles Design Engineer - Software LECO Corporation - Separation Sciences http://www.leco.com<http://www.leco.com/> [Term] id: MS:1000895 name: local retention time def: "A measure of the interval relative to the beginning of a mass spectrometric run when a peptide will exit an unspecified local chromatographic column and instrumental setup." [PSI:MS] xref: value-type:xsd\:float "The allowed value-type for this CV term." is_a: MS:1000894 ! retention time relationship: has_units UO:0000010 ! second relationship: has_units UO:0000031 ! minute [Term] id: MS:1000826 name: elution time def: "The time of elution from a chromatographic column, relative to the start of the chromatography." [PSI:MS] xref: value-type:xsd\:float "The allowed value-type for this CV term." is_a: MS:1000503 ! scan attribute relationship: has_units UO:0000010 ! second relationship: has_units UO:0000031 ! minute ________________________________ LECO Corporation Notice: This communication may contain confidential information intended for the named recipient(s) only. If you received this by mistake, please destroy it and notify us of the error. Thank you.
25 DST+PFTBA Stick 25sps CA0.5_4_PEAKS.mzML
Description: 25 DST+PFTBA Stick 25sps CA0.5_4_PEAKS.mzML
------------------------------------------------------------------------------ Special Offer -- Download ArcSight Logger for FREE! Finally, a world-class log management solution at an even better price-free! And you'll get a free "Love Thy Logs" t-shirt when you download Logger. Secure your free ArcSight Logger TODAY! http://p.sf.net/sfu/arcsisghtdev2dev
_______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mzmine-devel