Hi Li,
To show a single peak, go to the peak list table and right mouse click -> Show…
-> Peak in 3D.
(I assume you completed peak detection)
Tomas
On Oct 20, 2011, at 11:17 PM, Li Zhang wrote:
>
> Tomas,
>
> Thanks for your email. It is on Window 7, 64 bit. I follow this tip below
> but still have the same prolbem-mzmine cannot find the Java3D.
> Then I put the Java3D in the default pathway of JRE6 (Java-jre6-java3D). In
> this PC only one copy of java3D and JRE 6 were installed. Now mzmine 3d
> could process data and
> Generate a 3D picture which I can move around! But, the combo box never show
> up below the choice such that I cannot zoom into a single peak to get its 3D
> picture.
>
> I appreaicate it if you could help me to overcome this prolbem.
>
> Li
>
> [Mzmine-devel] SOLVED - Java 3D plot on Windows 7
> mark.earll
> Thu, 04 Nov 2010 05:13:03 -0700
> Hi Tomas,
>
> My colleague Chris Pudney has found the solution to the 3D plot not working in
> Windows7 64bit
>
> I had installed the early access (EA - update 23) version from
> http://download.java.net/jdk6/
> jre-6u23-ea-bin-b03-windows-amd64-18_oct_2010.exe but Chris informs me the
> current official release is update 22 and the 64-bit Windows version is
> available via
> http://www.oracle.com/technetwork/java/javase/downloads/index.html (then
> "Download JRE" will provide the option to select Windows x64).
>
> Then I downloaded and installed j3d-1_5_2-windows-amd64.exe (this also applies
> if you have an intel processor like I have)
>
> You then have the 64-bit JRE installed and 64-bit Java3D installed but the
> final piece of the puzzle is to make sure that the JRE knows about Java3D by
> installing Java3D as a Java extension. Determine where the 64-bit JRE is
> installed, e.g. C:\Program Files\Java\jre6 - let's call this JRE_HOME, and
> then
> copy the JAR files from \Java\java3D\1.5.2\lib\ext to JRE_HOME\lib\ext and the
> DLL files from \Java\java3D\1.5.2\bin (?) to JRE_HOME\bin. So, the directory
> structure and files in
>
> \Java\java3D\1.5.2 should be replicated under JRE_HOME, e.g.
>
>
>
> JRE_HOME\lib\ext\j3dcore.jar
>
> JRE_HOME\lib\ext\j3dutils.jar
>
> JRE_HOME\lib\ext\vecmath.jar
>
> JRE_HOME\bin\j3dcore-ogl.dll
>
>
>
>
> From: Tomas Pluskal [mailto:plus...@oist.jp]
> Sent: Wednesday, October 19, 2011 10:52 PM
> To: Developer discussion
> Cc: Li Zhang
> Subject: Re: [Mzmine-devel] 3D visalizer
>
> Hi Li,
>
> The 3D visualizer is working. Your Java3D installation is probably not linked
> correctly to your Java runtime.
> Do you have multiple JRE installed? 32-bit vs 64-bit? Did you install 32-bit
> or 64-bit Java3D?
> What OS platform are you using, actually?
>
> Tomas
>
>
> On Oct 11, 2011, at 2:06 AM, Li Zhang wrote:
>
>
> Hello,
>
> The 3D visalizer seems not working in 2.3. It says that Java3D is not
> installed, but I did install it in the pc.
>
> If you know how to get it work, please let me know. Thanks.
>
>
>
> Dr. Li Zhang, | LECO Separation Sciences
> Applications Chemist
> Saint Joseph, MI, USA
> Office: (269)985-5887
> www.LECO.com
>
> <image001.jpg>
> Don't forget to sign-up for LECO's eNewsletter here
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>
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> Tomas Pluskal
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Tomas Pluskal
G0 Cell Unit, Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
TEL: +81-98-966-8684
------------------------------------------------------------------------------
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