Hi,

> Me again. Well I had tried a lot of things, including using different 
> computer to run the Baseline Correction but it doesn't seems to work at all. 
> I also don't know whats wrong with it. 
> Anyway i also encounter another problem regarding the Peak lists. Since i 
> collect these data from the Thermo instrument i wonder MZmine 2 cope with 
> Thermo data? 

I don't know why this happens, either.

> Following is my steps by steps. 
> 1. I input my RAW data. 
> 2. Then these data underwent scan by scan filtering - Resampling filter (set 
> the m/z bin at 0.5). This will generate a new raw data file named .RAW 
> filtered
> 3. Newly generated .RAW filtered file was selected for Peak Detection - where 
> Centroid with 5.0E3 noise level. From here Peak list .RAW filtered 
> chromatograms will be generated.
> However, i double clicked this file and surprisingly found that there were 
> nothing on the list. (the attached pic).


Please 
1) Send us ALL the parameter values you used for each step
2) Send us your data file so we can reproduce the problem

> I wonder is it related to my computer problem or the incompatibility of 
> MZmine with Thermo RAW files. 

MZmine works fine with Thermo RAW files.

Tomas


===============================================
Tomas Pluskal
G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University
1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
TEL:  +81-98-966-8684

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