Sonia,

>From your last message I'm not sure if your problem is solved, but if
not maybe this will help. These are the R settings we have on a 64-bit
Windows machine here which seems to be working properly with MzMine: 

rem Set R environment variables.
set R_HOME=C:\Program Files\R\R-3.0.3
set R_SHARE_DIR=%R_HOME%\share
set R_INCLUDE_DIR=%R_HOME%\include
set R_DOC_DIR=%R_HOME%\doc
set R_LIBS_USER=%R_HOME%\library

rem Include R DLLs in PATH.
set PATH=%PATH%;%R_HOME%\bin\x64
echo %PATH%

rem The directory holding the JRI shared library (libjri.so).
set JRI_LIB_PATH=%R_LIBS_USER%\rJava\jri\x64


Obviously you need to change the R version in the R_HOME variable to the
version that you are using (3.1.0). Hope that helps.

-- 
Thomas McGrew
Data Analyst/Software Developer
Bindley Bioscience Center @ Purdue University


On Tue, 2014-05-06 at 01:28 -0700, sonia wrote:
> Hi, 
> 
> I have just checked the code " set R_HOME="C:\Program Files\R\R-3.1.0" and
> there is only one space in it.
> I have also put it in the command line and i do have access to the file.
> 
> 
> Best Regards.  
> 
> 
> 
> 
> --
> View this message in context: 
> http://mzmine-devel-developer-discussion.970458.n3.nabble.com/Problem-with-R-path-MZ-mine-start-tp4024372p4024376.html
> Sent from the Mzmine-devel -- Developer discussion mailing list archive at 
> Nabble.com.
> 
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