Hi,
I have the following linked workflow in my REPEAT plugin, where the puzzle of
interest at the moment is “RegisterImages” which is part of the “run”
sub-workflow in the RunRegistration.scala file. In the apply function of the
RegisterImages object, I create this puzzle piece using strainer capsules such
that I don’t have to know/pass all Prototype variables as arguments. The
problem with this is that the registration task is never executed and either
the output file handling of OpenMOLE, the CopyFileHook or a following task
produces a FileNotFoundException for the phiDof output File which was never
produced by the task.
When I don’t use a strainer capsule for the tasks named “RegisterImagesBegin”
and “RegisterImages” in RegisterImages.scala everything works fine.
I am curious why I cannot get it to work with strainer capsules and what is
wrong with below code ?
Workflow: RunRegistration.scala
<https://github.com/schuhschuh/REPEAT/blob/2f53c2fab2393596aec71d8446a850602ceb61cc/src/main/scala/com/andreasschuh/repeat/workflow/RunRegistration.scala>
Puzzle: RegisterImages.scala
<https://github.com/schuhschuh/REPEAT/blob/2f53c2fab2393596aec71d8446a850602ceb61cc/src/main/scala/com/andreasschuh/repeat/puzzle/RegisterImages.scala#L116>
Thanks,
Andreas
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