Sorry about the delay. I used gdal_translate as you told and some gdalinfo 
output sample is now: https://pastebin.com/dzXLKQp4 I will leave this 
running the no harmonization pipeline and next one tomorrow. In case it 
fails, I will try again with a clean installation (half my hd is full of 
stack and conda junk) but it will take a couple days. Thank you for your 
patience.


On Wednesday, September 19, 2018 at 9:54:13 AM UTC+2, Rémi wrote:
>
> Hello Gus,
> I don't think so because the entire process is streamable.
>
> It's difficult for me to help you without the full log. Can you run on 
> linux the following commands:
>
> otbcli_Mosaic -il /media/gus/Gus/seagrass/3_band/* -out 
> /media/gus/Gus/seagrass/processed_data/r2_simple_noharmo.tif uint8 -ram 128 
> >/media/gus/Gus/seagrass/noharmo.log 2>&1 
> otbcli_Mosaic -il /media/gus/Gus/seagrass/3_band/* -out 
> /media/gus/Gus/seagrass/processed_data/r2_simple_noharmo.tif uint8 
> -harmo.method band >/media/gus/Gus/seagrass/harmo.log 2>&1 
>
> (Then, you send me the logs)
>
> Also, please copy/paste the gdalinfo command on your converted geotiff 
> (without PACKBITS compression)
>
> Le mardi 18 septembre 2018 13:40:22 UTC+2, Gus a écrit :
>>
>> No, it didn't, but I separated two sets, one for each flight, and one of 
>> them did ran (I still didn't try the other). May it be related to some 
>> convergence during optimization process?
>>
>> On Tuesday, September 18, 2018 at 10:30:28 AM UTC+2, Rémi wrote:
>>>
>>> do you mean that, for every single input image, I need to load an array 
>>>> with the full size of the output mosaic?
>>>>
>>> No. The application computes the distance map for each input image, one 
>>> by one. Not for the entire mosaic.
>>>
>>> Did the change of image file format solve your issue?
>>>
>>>

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