List,

A footnote to the peer review process problem I mentioned in connection
with Alfven's work. A recent study has revealed a major problem involving
"self-citation."


Citation metrics indicate how often a scientist's research output is
formally referenced by colleagues in the footnotes of their own papers –
but a comprehensive analysis of this web of linkage shows the system is
compromised by a hidden pattern of behaviour that often goes unnoticed.

Specifically, among the 100,000 most cited scientists between 1996 to 2017,
there's a stealthy pocket of researchers who represent "extreme
self-citations and 'citation farms' (relatively small clusters of authors
massively citing each other's papers)," explain the authors of the new study
<https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3000384>,
led by physician turned meta-researcher John Ioannidis from Stanford
University.


One can read more about it in this article in *Nature*.
https://www.nature.com/articles/d41586-019-02479-7

Best,

Gary

*Gary Richmond*
*Philosophy and Critical Thinking*
*Communication Studies*
*LaGuardia College of the City University of New York*




On Wed, Aug 28, 2019 at 5:46 PM Gary Richmond <[email protected]>
wrote:

> Jeff, List,
>
> Thanks for this these interesting comments, some of which I was able to
> follow.
>
> For now I'll only remark that I have for many decades been interested in
> Alfven's plasma cosmology finding it an intriguing alternative to Big Bang
> theory. Here's an encyclopedia entry very critical of Alfven's cosmology as
> many astrophysicists have been. But, as you may know, I see quite a bit of
> astrophysical dogma evident in much of Big Bang theory. Still, and despite
> its bias, the article gives a decent overview of some aspects of Alfven's
> theory.
> https://en.wikipedia.org/wiki/Plasma_cosmology
>
> If you're not familiar with Alfven, here's a passage from a biographical
> entry commenting on the negative reaction to his work by especially British
> cosmologists following his being awarded the Nobel Prize, and Alfven's
> sense that much of this had to do with a broken peer-review system,
> something many of us here see as a major problem worldwide. Joe Ransdell,
> for one, found the present system highly problematic and looked to better
> alternatives to current approaches to peer review. And having been involved
> in the review process for a number of publications over the years, I have
> seen first hand many of its problems (bias, inappropriate reviews,
> substandard reviews, and other abuses.)
>
> Here's a snippet from the biographical article on Alfven.
> https://en.wikipedia.org/wiki/Hannes_Alfvén
>
> In 1937, Alfvén argued that if plasma
> <https://en.wikipedia.org/wiki/Plasma_(physics)> pervaded the universe,
> it could then carry electric currents capable of generating a galactic
> magnetic field. After winning the Nobel Prize for his works in
> magnetohydrodynamics <https://en.wikipedia.org/wiki/Magnetohydrodynamics>,
> he emphasized that:
>
> In order to understand the phenomena in a certain plasma region, it is
> necessary to map not only the magnetic but also the electric field and the
> electric currents. Space is filled with a network of currents which
> transfer energy and momentum over large or very large distances. The
> currents often pinch to filamentary or surface currents. The latter are
> likely to give space, as also interstellar and intergalactic space, a
> cellular structure.
>
> His theoretical work on field-aligned electric currents in the aurora
> (based on earlier work by Kristian Birkeland
> <https://en.wikipedia.org/wiki/Kristian_Birkeland>) was confirmed in
> 1967, these currents now being known as Birkeland currents
> <https://en.wikipedia.org/wiki/Birkeland_current>.
>
> Alfvén's work was disputed for many years by the senior scientist in space
> physics, the British mathematician
> <https://en.wikipedia.org/wiki/Mathematician> and geophysicist
> <https://en.wikipedia.org/wiki/Geophysics>Sydney Chapman
> <https://en.wikipedia.org/wiki/Sydney_Chapman_(astronomer)>. Alfvén's
> disagreements with Chapman stemmed in large part from trouble with the peer
> review <https://en.wikipedia.org/wiki/Peer_review> system. Alfvén rarely
> benefited from the acceptance generally afforded senior scientists in 
> scientific
> journals <https://en.wikipedia.org/wiki/Scientific_journal>. He once
> submitted a paper on the theory of magnetic storms
> <https://en.wikipedia.org/wiki/Magnetic_storm> and auroras
> <https://en.wikipedia.org/wiki/Auroral_light> to the American journal 
> *Terrestrial
> Magnetism and Atmospheric Electricity
> <https://en.wikipedia.org/wiki/Terrestrial_Magnetism_and_Atmospheric_Electricity>*
>  only
> to have *his paper rejected on the ground that it did not agree with the
> theoretical calculations of conventional physics of the time.* He was
> regarded as a person with unorthodox opinions
> <https://en.wikipedia.org/wiki/Fringe_science>* in the field by many
> physicists *(emphasis added by me).
>
>
> "Unorthodox" and non-conventional indeed!
>
> I'm not at my desk now, and I'll be heading up to Martha's Vineyard for an
> event at the beginning of September. If you think Alfven's thought might be
> a valuable contribution to this discussion, I'll go to my downtown
> apartment before we leave for MV and pick up my copy of Alfven's most
> complete discussion of his plasma theory in book form which, as I recall,
> has my copious notes written when I was studying it years ago (the last
> time I picked it up it was 4 or 5 years ago). I hope that I'll have some
> down time to review it in early September.
>
> My concern, however, is that we get too far away from matters related to
> Peirce's own cosmological thinking that it might, at least at some point,
> make sense to take such a discussion off-list for those who might be
> interested in it. It is, of course, also possible that Alfven's cosmology
> will prove relevant in the list discussion.
>
> Best,
>
> Gary R
>
>
> *Gary Richmond*
> *Philosophy and Critical Thinking*
> *Communication Studies*
> *LaGuardia College of the City University of New York*
>
>
>
>
> On Wed, Aug 28, 2019 at 4:48 PM Jeffrey Brian Downard <
> [email protected]> wrote:
>
>> Jon S, Gary F, List,
>>
>> Peirce provides definitions for dimension, dimensional and dimensionality
>> in the Century Dictionary. Nothing jumps out at me in the definitions
>> offered, but it is worth noting that he does make a distinction between the
>> dimensions of a mathematical space and that of a physical space.
>>
>> For the sake of understanding the points made in the last lecture of RLT,
>> the discussion of topological dimensions in the EM and
>> the NEM are particularly helpful resources. There, Peirce describes the
>> various ways that a particle can be moved from a point, a filament from a
>> line, etc. This is consonant with the contemporary way of talking about
>> the dimensions of a topological space in terms of the degrees of freedom
>> that something can be moved.
>>
>> Those mathematical ideas can be applied to physical space by asking
>> questions about how something like an atom or a sub-atomic particle might
>> be able to move. My sense is that Peirce is thinking in terms of
>> continuous spatial fields as being more fundamental than discrete
>> particles.
>>
>> Cosmologically speaking, the permanence of something like a Hydrogen atom
>> is explained in terms of the parts (e.g., the proton) of that whole
>> evolving from something more basic. So, if we consider something like
>> an extremely high-temperature plasma in which the particles (e.g., the
>> quarks, leptons and bosons) are moving relatively freely in relation to one
>> another, then it is helpful to think of those "particles" as spread areas
>> of charge in a field.
>>
>> If we think of the laws of physics as evolving in the early stages of the
>> development of the universe, how might we envision gravity, and the strong
>> and weak forces operating in a relatively dense plasma? More to the point,
>> how might we envision the laws of time and space evolving where the
>> universe is comprised of a dense plasma of charged areas in a
>> multi-dimensional field?
>>
>> In order to conceive of the evolution of time and space as involving a
>> trend having a decrease in number from a vague infinity of dimensions to a
>> more determinate number (e.g., from more than 100, to 12, to 10 to 4), we
>> need some kind of tools to picture how this might work. Two of the
>> resources that Peirce worked with in his various studies of topology,
>> projective geometry and metrical geometries are Riemannian manifolds and
>> Klein groups.
>>
>> Those probably give us what we need for thinking, at least in broad
>> terms, about the character of the dimensions of a space that are (1) vague
>> and (2) infinite. Setting aside metrical considerations (which will
>> naturally make things more vague), the question becomes a matter of
>> explaining how a topological space (which may be folded, knotted and
>> twisted in many ways) might evolve into a space that has projective
>> characteristics (where there is "straightness" or homoloidal properties,
>> but no preservation of angles or lengths under transformations).
>>
>> If you will, let me think out loud using very rough terms about how some
>> of the characteristics of sub-atomic particles in a plasma might change as
>> those particles move through a space of high dimensions. What follows
>> is conjectural in character. In the case of a real physical space that
>> is highly folded, knotted and twisted, where the "particles" are charged
>> areas that move through the space, how should we conceive of the
>> dimensionality of such a space in the initial phases where the laws of time
>> and space themselves are evolving as the number of dimensions of that space
>> decrease?
>>
>> It helps, I think to distinguish between the global character of such a
>> space and its local character. Locally speaking, I imagine that the charged
>> areas might "break up" into smaller areas as they move through different
>> "branches" (i.e., handles, like a hole in a torus) that may twist (i.e.,
>> cross caps, as with a Mobius band) and that are knotted together and
>> then recombine with other moving charged areas.
>>
>> We tend to think of subatomic particles (e.g., quarks) as having
>> relatively fixed masses (voltages). Neutrinos, on the other hand, have mass
>> values that are simply less than a particular voltage value. This seems to
>> imply that they have an amount of energy that may vary, perhaps up to some
>> limit. Furthermore, I suspect the value of the charge and perhaps the value
>> of the spin (the angular momentum) of the charged areas moving through a
>> field may change as the charged area moves through a twist in the space.
>>
>> How might we study something as complex as a highly folded, twisted and
>> knotted space? As with any kind of relatively complex topological space, it
>> helps to decompose that space into its component parts. As such, we
>> can focus on one simpler two-dimensional surface at a time, and then think
>> about the various ways such surfaces might be connected. What is more, we
>> can think of the possible paths that things might travel on that surface as
>> edges in a graph. Those, I suspect, are kinds of the techniques we might
>> profitably employ to study the question of how the dimensions of space and
>> time might have evolved in the early history of the cosmos.
>>
>> Thanks for your patience as I've tried to talk out loud. In order to
>> make any progress in cosmological metaphysics, we will need to make a
>> transition from these sorts of conjectural musings on matters of
>> cosmological physics to something that is easier to get one's mind
>> around. As such, in a future post, I'd like to take up some
>>  graph-theoretical explorations of how we might think about the
>> dimensions of space and time. In doing so, the aim will be to create some
>> kind of diagram that helps to picture how time and space might be evolving
>> from a vague infinity of dimensions to a more determinate and smaller
>> number of dimensions.
>>
>> --Jeff
>>
>>
>> Jeffrey Downard
>> Associate Professor
>> Department of Philosophy
>> Northern Arizona University
>> (o) 928 523-8354
>>
>>
>> ------------------------------
>> *From:* Jon Alan Schmidt <[email protected]>
>> *Sent:* Tuesday, August 27, 2019 8:01 PM
>> *To:* [email protected]
>> *Subject:* Re: Re: Re: [PEIRCE-L] Re: Peirce and the Big Bang
>>
>> Jeff, List:
>>
>> JD (below):  What is the general trend:  an increase in dimensions from 1
>> to 4, or a decrease in dimensions from infinity to four? How might the
>> rival metaphysical hypotheses be tested?
>>
>> JD (to Gary F.):  We have to ask, if real space has 3 dimensions, then
>> why is it a whole number and not an answer involving a decimal or
>> fractional expression?
>>
>>
>> Those are interesting questions, but I suggest that we first explore a
>> more fundamental one--what is a *dimension *in this context?
>>
>> According to Wikipedia <https://en.wikipedia.org/wiki/Dimension>, "the 
>> *dimension
>> *of a mathematical space (or object) is informally defined as the
>> minimum number of coordinates needed to specify any point within it."  Of
>> course, discrete coordinates--as well as the discrete positions and
>> instants that they are intended to mark--are arbitrary and artificial
>> creations of thought for the purpose of describing motion through
>> space-time, which in itself is continuous.  Does this perhaps entail that
>> discrete dimensions of *any *whole number are likewise arbitrary and
>> artificial creations of thought--hypothetical *representations *of
>> space-time, rather than *real *characters of it?
>>
>> The definition of a dimension given in the second video linked in the
>> post addressed to Gary F.--the one about fractals--is even more obviously
>> arbitrary and artificial as a measure of "roughness."  What *meaning *could
>> we assign to a decimal or fractional value somehow assigned to *real 
>> *space-time
>> as a continuous whole?
>>
>> Regards,
>>
>> Jon Alan Schmidt - Olathe, Kansas, USA
>> Professional Engineer, Amateur Philosopher, Lutheran Layman
>> www.LinkedIn.com/in/JonAlanSchmidt - twitter.com/JonAlanSchmidt
>>
>> On Tue, Aug 27, 2019 at 6:35 PM Jeffrey Brian Downard <
>> [email protected]> wrote:
>>
>>> Gary R., Jon S, Edwina, John S, List,
>>>
>>> Keeping in mind the distinction that Peirce makes between metaphysical
>>> cosmology and physical cosmology, let me again stress a point made earlier.
>>> Instead of assuming that, at any point in his inquiries, Peirce typically
>>> affirmed one answer to each of the main questions in metaphysical
>>> cosmology, I tend to think that he explored a fairly wide range of possible
>>> answers.
>>>
>>> In any given text, he often does spend more effort on one set
>>> of hypotheses and less on others. And, over the course of his career, he
>>> often does reassess the options he has considered up to that point. As a
>>> result of the inquiries, he does give greater weight to the plausibility of
>>> some metaphysical hypotheses as compared to others. In many cases where he
>>> might seem to be "taking a position", I find that he is merely pointing to
>>> defects in some of the hypotheses. Most of the hypotheses offered in
>>> the cosmological metaphysics of his time failed in some degree to explain
>>> phenomena that clearly called out for explanation (e.g., why does our
>>> common experience of time involve 1 ordered dimension and our experience
>>> of space involve 3 dimensions?) In some cases, the problematic hypotheses
>>> might have been amended to remedy such defects.
>>>
>>> I tend to think that Peirce was remarkably sanguine about the fact that
>>> the big questions in metaphysics like "What is the origin of all things?"
>>> and "How did the universe evolve from such beginnings?" are the kinds of
>>> questions that get answered over the course of millennia by whole
>>> communities of inquirers and not by any individual during the course of a
>>> lifetime. As such, I am cautious about proclaiming that Peirce's
>>> position on these types of questions was, at some particular point in his
>>> career, "X" or that his final mature position was "Y". Rather, I think that
>>> he took his own advice on questions of metaphysics and tended to hold some
>>> metaphysical hypotheses as more plausible than others because they offered
>>> better explanations of the phenomena at hand or as worthy of our attention
>>> because they were easier to test.
>>>
>>> I find it more interesting to articulate the *reasons *he offers for
>>> holding that one hypothetical explanation is better than other than to
>>> insist, on textual grounds, that some answer to a question was his
>>> considered and mature view. Clarity about the conceptions employed in the
>>> rival hypotheses comes from understanding those reasons and especially from
>>> seeing what we might do to put the rival explanations to the test.
>>>
>>> So, here is a question. Consider two hypotheses: (a) the four dimensions
>>> of space and time that are characteristic of the world in which we
>>> live evolved by a process of an *increase* from a one-dimensional
>>> continuum and (b) the four dimensions of space and time that are
>>> characteristic of the world in which we lived are the result of a process
>>> of decrease from an objectively vague state having an infinite number of
>>> dimensions. What is the general trend:  an increase in dimensions from 1 to
>>> 4, or a decrease in dimensions from infinity to four? How might the rival
>>> metaphysical hypotheses be tested?
>>>
>>> Yours,
>>>
>>> Jeff
>>> Jeffrey Downard
>>> Associate Professor
>>> Department of Philosophy
>>> Northern Arizona University
>>> (o) 928 523-8354
>>>
>>>>
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