On Wed, Oct 30, 2013 at 4:41 PM, Maxime Boissonneault < [email protected]> wrote:
> Hi, > Here is the attached configure.log file. > > I will try the flag --with-debugging tomorrow. > Get rid of -O2: CFLAGS="-O2 -xHost -mkl -fPIC -m64" FFLAGS="-O2 -xHost -mkl -fPIC -m64" --prefix=/software6/libs/petsc/3.4.3_intel --with-dynamic-loading --with-x=0 --with-mpi-compilers=1 --with-mpi-dir=/software6/mpi/openmpi/1.6.5_intel --known-mpi-shared-libraries=1 --with-debugging=no --with-shared-libraries=1 --with-blas-lapack-dir=/software6/compilers/intel/composer_xe_2013_sp1/lib/intel64 Don't need this --with-scalapack=1 --with-scalapack-include=/software6/compilers/intel/composer_xe_2013_sp1/include --with-scalapack-lib=/software6/compilers/intel/composer_xe_2013_sp1/lib/intel64/libmkl_scalapack_lp64.a Don't need this --with-blacs=1 --with-blacs-include=/software6/compilers/intel/composer_xe_2013_sp1/include --with-blacs-lib=/software6/compilers/intel/composer_xe_2013_sp1/lib/intel64/libmkl_blacs_openmpi_lp64.a --download-mumps=yes --download-ptscotch=1 --download-superlu=yes --download-superlu_dist=yes --download-parmetis=yes --download-metis=yes --download-ml=yes This is deprecated. Use -pc_type gamg --download-prometheus=yes --download-hypre=yes Matt > > Maxime > > Le 2013-10-30 16:49, Matthew Knepley a écrit : > > On Wed, Oct 30, 2013 at 3:39 PM, Maxime Boissonneault < > [email protected]> wrote: > >> Hi, >> I am currently trying to compile PETSc 3.4.3 with ICC 14.0 and OpenMPI >> 1.6.5 and it fails SuperLU_Dist. >> >> I am getting the following error : >> >> 68303 /software6/mpi/openmpi/1.6.5_intel/bin/mpicc >> -I/software6/mpi/openmpi/1.6.5_intel/include >> -I/software6/mpi/openmpi/1.6.5_intel/include -O2 -xHost -mkl -fPIC -m64 >> -fPIC -O3 -DAdd_ -DUSE_VENDOR_BLAS -c pdgstrf.c >> 68304 make[1]: Leaving directory >> `/software6/src/petsc-3.4.3-intel-try/externalpackages/SuperLU_DIST_3.3/SRC' >> 68305 error #13002: unexpected CFE message argument: e. The staggered >> cosine transform may be >> 68306 warning #13003: message verification failed for: 556; reverting to >> internal message >> 68307 pdgstrf.c(2672): warning #556: a value of type "int" cannot be >> assigned to an entity of type "MPI_Request" >> 68308 U_diag_blk_send_req[krow] = 1; /* flag outstanding >> Isend */ >> 68309 ^ >> 68310 >> 68311 pdgstrf.c(2672): warning #152: Fatal error: Trigonometric Transform >> has failed to release the memory. >> 68312 U_diag_blk_send_req[krow] = 1; /* flag outstanding >> Isend */ >> 68313 ^ >> 68314 >> 68315 compilation aborted for pdgstrf.c (code 1) >> 68316 make[1]: *** [pdgstrf.o] Error 1 >> >> Anyone has a clue on to what might be going on ? >> > > 1) Always send configure.log > > 2) It looks like an Intel compiler bug. Try building with > --with-debugging first > > Matt > > >> >> -- >> --------------------------------- >> Maxime Boissonneault >> Analyste de calcul - Calcul Québec, Université Laval >> Ph. D. en physique >> >> > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > > > > -- > --------------------------------- > Maxime Boissonneault > Analyste de calcul - Calcul Québec, Université Laval > Ph. D. en physique > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener
