Hi Hernán, The input should be independent from the visualization engine. Roassal offers you a way of transforming your objects into a visualization and it should not be responsible for the input formats.
Cheers, Doru On Thu, Dec 26, 2013 at 9:28 PM, Hernán Morales Durand < [email protected]> wrote: > Hi Alexandre and Ricardo, > > I am glad to see your advances in Roassal visualization! > I wonder which input formats do you plan to support? > > Your relation tower can be used to visualize the crossover percentages > between haplotype blocks. For example, here are some Haplotypes drawings > from Haploview (http://en.wikipedia.org/wiki/Haploview) which may > interest you: > > > http://www.jnsbm.org/viewimage.asp?img=JNatScBiolMed_2012_3_2_139_101887_f13.jpg > from this paper > http://www.jnsbm.org/temp/JNatScBiolMed32139-5367486_145434.pdf > > http://www.mailund.dk/wp-content/uploads/2010/04/haplotypes.png > > http://www.mailund.dk/wp-content/uploads/2010/04/journal.pone_.0010207.g005.png > > I can send you the exported haplotypes from a study if you are interested. > It contains 131 blocks which is somewhat big to attach to this list. The > only problem I see is that a parser is needed to parse the Haplotype text > output file, although the format should not be difficult to parse. > > Cheers, > > Hernán > > > > > > > > 2013/12/17 Alexandre Bergel <[email protected]> > >> Hi! >> >> A new builder for Roassal is coming… The goal of Relation tower is to >> easily visualize relations between group of elements. We had the >> inspiration from the following website http://peoplemov.in/#! >> >> Here are some screenshots: >> >> https://www.facebook.com/media/set/?set=a.559114290841839.1073741837.340543479365589&type=3 >> >> If you like these screenshots, then you know where the like button is :-) >> >> We will have this visualization on the web, thanks to our smooth and nice >> Pharo2Amber migration process. >> >> Any idea on how to extend/apply Relation tower? Any set of data you want >> us to play with? Your data? >> Feedback are very welcome! >> >> Cheers, >> Ricardo & Alexandre >> >> -- >> _,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;: >> Alexandre Bergel http://www.bergel.eu >> ^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;. >> >> >> > -- www.tudorgirba.com "Every thing has its own flow"
