Camille,
If I understand your question, you're looking for the setting
which creates a discrete color transition at the edges of helices and
strands, instead of blending. It is:
set cartoon_discrete_colors, on
For example
color grey, name ca
color yellow, ss s and name ca
color red, ss h and name ca
set cartoon_discrete_colors, on
Cheers,
Warren
--
mailto:war...@delanoscientific.com
Warren L. DeLano, Ph.D.
Principal Scientist
DeLano Scientific LLC
Voice (650)-346-1154
Fax (650)-593-4020
> -----Original Message-----
> From: pymol-users-ad...@lists.sourceforge.net [mailto:pymol-users-
> ad...@lists.sourceforge.net] On Behalf Of cami...@mrc-lmb.cam.ac.uk
> Sent: Monday, January 19, 2004 7:37 AM
> To: Warren L. DeLano
> Cc: 'Michael Bovee'; pymol-users@lists.sourceforge.net
> Subject: Re: [PyMOL] homologous alignments?
>
> Hello,
> I am unable to read the archive at the moment.... so can anyone
tell
> me the command that allows colouring of the edge of helices and
strands
> (usually grey). I think this was posted recently but I don't have it
in
> any of my saved scripts.
>
> Many thanks,
> Camille
>
> Dr Camille Shammas
> Medical Research Council Laboratory of Molecular Biology Hills Road,
> Cambridge CB2 2QH, UK.
> Tel: +44 (0)1223 402407
> Mobile: 07812035842
> E-mail: cami...@mrc-lmb.cam.ac.uk
>
>
>
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