The application actually quits, hence the seg fault error. This
happens for quite a few files, and the only trend I saw was file size
since the smaller ones had no troubles.
- Charlie
On Nov 19, 2004, at 6:21 PM, Thomas Stout wrote:
version 0.98 (beta 07 and beta 17) loads PDB IS 1DT7 just fine. It's
a little slow, but it works! Are you sure you don't have "auto-zoom"
off? I turn auto-zoom off by default and as a result some entries
(like 1DT7) load but are not visible. Clicking the "zoom" button
brings it into the center of the graphics window.....
-Tom
-----Original Message-----
From: pymol-users-ad...@lists.sourceforge.net
[mailto:pymol-users-ad...@lists.sourceforge.net]on Behalf Of Charles
Moad
Sent: Friday, November 19, 2004 5:18 AM
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] cmd.read_pdbstr segfault
pymol-0.97 cmd.read_pdbstr is dieing for remotely large pdb files.
One
for example is 1DT7. I don't get a descriptive error:
/usr/local/bin/pymol: line 2: 10486 Segmentation fault
/usr/bin/python
/usr/local/lib/python2.3/site-packages/pymol/__init__.py
$*
Thanks,
Charlie
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