Hi,
I would like to get secondary structure information from a PyMOL
file. I searched the list and found this:
> I need a list of the secondary structure assigned to each residue
by dss in
> pymol. Is there a simple way to write this information to a file,
or dump it
> to the screen?
To dump it to the screen, try:
iterate <object name> & n. ca, print resn,resi,ss
and it works, but the output is a long list of every residue. Is
there a command to get the output more succinctly, such as
1-5 L
6-10 H
11-15 S
Thanks,
Frieda
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Frieda Reichsman
Molecules in Motion
Interactive Molecular Structures
http://www.moleculesinmotion.com
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