Hello: Im new at pymol and would like to obtain the coordinates of the dots that make up the solvent-accessible surface. I can obtain the vertices using cmd.get_povray()[1], but that will give me a list of coordinates of open cylinders with spheres at either end. Perhaps these sphere and cylinders are so small that I could use any of them as the coordinates for the surface dot. Or, would it be more exact to use the midpoint of the cylinder? Any suggestions?
Thanks, John ____________________________________________________________________________________ Be a better sports nut! Let your teams follow you with Yahoo Mobile. Try it now. http://mobile.yahoo.com/sports;_ylt=At9_qDKvtAbMuh1G1SQtBI7ntAcJ