Hi all,
I am brand new to PyMol. I have a model of a kinase, and another of a
heptapeptide
containing an experimentally derived phosphosite.
The RosettaDock documentation suggests:
PyMol can be a useful tool to position proteins relative to each
other. Use "editing" mode
from the right panel, and try right-clicking to select a chain and
"drag" to enable
translation and rotation of the molecule (typically requiring left-
shift + middle and
left buttons). Finally from the main menu, File→Export Molecule
can be used to write a
PDB file containing the starting structure with both docking
partners.
Try as I may, I cannot figure out how to do this. Whatever rotations
& translations I apply
to one molecule also affects the other.
I will be grateful for any advice this group can give.
Cheers,
- Paul
