Hi pkb bioinfo (which I do hope is not your real name),
Did you actually paste the script or did you retype it?
> from pymol import cmd
> from glob import glob
>
> lst = glob("*.pdb")
> lst.sort()
>
> for fil in lst:
> cmd.load(fil,"tmp")
> dst=cmd.distance('/tmp//A/LYS`203/NZ','/tmp//A/GLU`145/OE2')
> print lst
You set dst to be the distance, and then you print lst...
Cheers,
Tsjerk
--
Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623
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