Maia, You can already move structures independently. If you install PyMOL+FreeMOL you can have access to the MMFF-enabled PyMOL that will allow you to do small molecule cleanup and editing.
Try putting your mouse into "Editing Mode" and moving atoms around. It's not hard. Check this out: http://pymolwiki.org/index.php/Molecular_Sculpting for some help. Regards, -- Jason On Wed, Jan 20, 2010 at 11:52 AM, Maia Cherney <ch...@ualberta.ca> wrote: > > Hi Jason > > I need such features. I open two different pdbs and I want to manually move > one structure relative to another. I want to dock one structure into another > or superpose 2 structures manually. Is it possible? > > Or I want to move a fragment of the molecule relative to the rest of the > molecule. > Is it possible? > > > Maia > > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ Throughout its 18-year history, RSA Conference consistently attracts the world's best and brightest in the field, creating opportunities for Conference attendees to learn about information security's most important issues through interactions with peers, luminaries and emerging and established companies. http://p.sf.net/sfu/rsaconf-dev2dev _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
