Dear all,

Sorry I fixed the prepare_ligand4.py problem.  However, when I try to  
do the autodock in the plugin, the plugin cannot recognize the  
receptor so there is no choice available in the receptor in the  
docking page. If I click autogrid or autodock, the program shows no  
response.  Is there any setting I could check and fix it?

Thank you very much

Sing

On Feb 19, 2010, at 9:33 AM, pymol-users-requ...@lists.sourceforge.net  
wrote:

> Send PyMOL-users mailing list submissions to
>        pymol-users@lists.sourceforge.net
>
> To subscribe or unsubscribe via the World Wide Web, visit
>        https://lists.sourceforge.net/lists/listinfo/pymol-users
> or, via email, send a message with subject or body 'help' to
>        pymol-users-requ...@lists.sourceforge.net
>
> You can reach the person managing the list at
>        pymol-users-ow...@lists.sourceforge.net
>
> When replying, please edit your Subject line so it is more specific
> than "Re: Contents of PyMOL-users digest..."
>
>
> Today's Topics:
>
>   1. Re: coordinate systems of pymol and povray (Tsjerk Wassenaar)
>   2. FreeMOL (Jason Vertrees)
>   3. Re: PyMOL-users Digest, Vol 45, Issue 9 (Kin Sing Stephen Lee)
>   4. Save movie not working (Kent Rossman)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Thu, 18 Feb 2010 21:42:39 +0100
> From: Tsjerk Wassenaar <tsje...@gmail.com>
> Subject: Re: [PyMOL] coordinate systems of pymol and povray
> To: gabriela.schlau-co...@alumni.brown.edu,     pymol-users
>        <pymol-users@lists.sourceforge.net>
> Message-ID:
>        <8ff898151002181242o50721274q14324f2a14209...@mail.gmail.com>
> Content-Type: text/plain; charset="iso-8859-1"
>
> Hi Gabriela,
>
> If you only want to get the molecule back in view and rotate/translate
> it to your liking, you can use commands like:
>
> #declare Protein = union { #include  "protein.inc" }
> #declare Center = (min_extent(Protein)+max_extent(Protein))/2;
> object { Protein translate -Center }
>
> If you want to preserve the view you had in Pymol, you'll need
> something more. For this purpose I wrote a set of POV-Ray macros,
> which are attached. For this to work, you have to save the view from
> get_view(). If you used the (better ;)) second version of make_pov
> from the wiki, the view is already saved in the pov-ray file. Place
> the macro file somewhere where POV-Ray can find it, and uncomment the
> section in the .pov file starting with  "Uncomment the following
> lines" :) Now, if you want to add objects to your scene that you have
> defined based on the coordinates in the pdb file, you can use
> something like:
>
> // This draws a sphere of radius 1 at the origin of your .pdb  
> coordinate system
> sphere { 0, 1 SET_PYMOL_VIEW( PYMOL_VIEW )) }
>
> For more extensive information, read the first section of the file. If
> things are still unclear, feel free to contact me. And if you find
> that you've managed to do really cool stuff with it, please let me
> know :)
>
>
> Hope it helps,
>
> Tsjerk
>
> On Wed, Feb 17, 2010 at 5:07 PM, Gabriela Schlau-Cohen
> <gsad...@hotmail.com> wrote:
>> Hi all,
>>
>> I am trying to load a pymol graphic into povray and then add on  
>> geometric
>> objects.? I exported and loaded the molecular model from pymol  
>> successfully
>> using the make_pov.py script from the wiki. ?I can then copy and  
>> paste that
>> file into povray to generate the molecules through povray. ?Then,  
>> when I
>> save the object in pymol to get the molecular coordinates, the  
>> coordinates
>> are in a different system.
>> Can someone tell me how to get the molecular coordinates and a  
>> povray file
>> in the same coordinate system?
>> Thanks,
>> Gabriela
>> ________________________________
>> Hotmail: Trusted email with powerful SPAM protection. Sign up now.
>> ------------------------------------------------------------------------------
>> Download Intel? Parallel Studio Eval
>> Try the new software tools for yourself. Speed compiling, find bugs
>> proactively, and fine-tune applications for parallel performance.
>> See why Intel Parallel Studio got high marks during beta.
>> http://p.sf.net/sfu/intel-sw-dev
>> _______________________________________________
>> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
>> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
>> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>>
>
>
>
> --
> Tsjerk A. Wassenaar, Ph.D.
>
> Computational Chemist
> Medicinal Chemist
> Neuropharmacologist
> -------------- next part --------------
> A non-text attachment was scrubbed...
> Name: pymolmacro.inc.gz
> Type: application/x-gzip
> Size: 2390 bytes
> Desc: not available
>
> ------------------------------
>
> Message: 2
> Date: Thu, 18 Feb 2010 16:36:40 -0500
> From: Jason Vertrees <jason.vertr...@schrodinger.com>
> Subject: [PyMOL] FreeMOL
> To: pymol-users@lists.sourceforge.net
> Message-ID:
>        <79558d781002181336x4216e157w7181f92f24cbd...@mail.gmail.com>
> Content-Type: text/plain; charset=ISO-8859-1
>
> PyMOLers,
>
> The FreeMOL website is back up as it was before (http://freemol.org).
> FreeMOL is still open-source, based off the original bioinformatics
> project.  The only difference is the location of the webserver: it is
> now running from a Schrodinger server to give me better access (again,
> Warren's servers only had FTP access, we now have ssh).
>
> Please let me know if anything's missing.
>
> Thanks for being patient,
>
> -- Jason
>
> --
> Jason Vertrees, PhD
> PyMOL Product Manager
> Schrodinger, LLC
>
> (e) jason.vertr...@schrodinger.com
> (o) +1 (603) 374-7120
>
>
>
> ------------------------------
>
> Message: 3
> Date: Fri, 19 Feb 2010 01:37:24 -0800
> From: Kin Sing Stephen Lee <leek...@msu.edu>
> Subject: Re: [PyMOL] PyMOL-users Digest, Vol 45, Issue 9
> To: pymol-users@lists.sourceforge.net
> Message-ID: <23b94f8e-04b7-4718-8758-90b247c5d...@msu.edu>
> Content-Type: text/plain; charset=US-ASCII; format=flowed; delsp=yes
>
> Thank you Daniel,
>
> I finally found the Autodock tool path in Mac however, i got another
> error message: "ImportError: No module named MolKit"  Is there any
> solution for this in Mac?
>
> Thank you very much
>
> Sing
>
> On Feb 18, 2010, at 10:56 AM, pymol-users-
> requ...@lists.sourceforge.net wrote:
>
>> Send PyMOL-users mailing list submissions to
>>      pymol-users@lists.sourceforge.net
>>
>> To subscribe or unsubscribe via the World Wide Web, visit
>>      https://lists.sourceforge.net/lists/listinfo/pymol-users
>> or, via email, send a message with subject or body 'help' to
>>      pymol-users-requ...@lists.sourceforge.net
>>
>> You can reach the person managing the list at
>>      pymol-users-ow...@lists.sourceforge.net
>>
>> When replying, please edit your Subject line so it is more specific
>> than "Re: Contents of PyMOL-users digest..."
>>
>>
>> Today's Topics:
>>
>>  1. Autodock plugin (Kin Sing Stephen Lee)
>>  2. Re: Autodock plugin (Daniel Seeliger)
>>  3. Update & Submitting Bugs (Jason Vertrees)
>>  4. Re: Update & Submitting Bugs (Christoph Gohlke)
>>  5. Re: Update & Submitting Bugs (Jason Vertrees)
>>  6. Re: Update & Submitting Bugs (Christoph Gohlke)
>>  7. Regarding the Control panel in pymol (phani ghanakota)
>>  8. Re: Regarding the Control panel in pymol (Jason Vertrees)
>>  9. coordinate systems of pymol and povray (Gabriela Schlau-Cohen)
>>
>>
>> ----------------------------------------------------------------------
>>
>> Message: 1
>> Date: Tue, 16 Feb 2010 11:06:40 -0800
>> From: Kin Sing Stephen Lee <leek...@msu.edu>
>> Subject: [PyMOL] Autodock plugin
>> To: "pymol-users@lists.sourceforge.net"
>>      <pymol-users@lists.sourceforge.net>
>> Message-ID: <333eebd7-7c78-48d5-90ae-ff9907837...@msu.edu>
>> Content-Type: text/plain; charset=US-ASCII; format=flowed; delsp=yes
>>
>> Dear all,
>>
>> This is the first time for me to use the autodock plugin and I have
>> some simple questions.  I'm using Macbook Pro (OS X v 10.5 -
>> leopard).  Autodock and autodock tools run fine in the X11 terminal.
>> In the autodock plugin, I need to put in the autodock tool program
>> path,so I put in the path where I installed the autodock tool (under
>> applications folder).  When I tried to prepare my receptor and ligand
>> file,  the plugin cannot find the autodock tools  
>> (prepare_receptor4.py
>> as well as prepare_ligand4.py) so I am wondering where I can find the
>> autodock tools program path or is it possible to use the plugin in
>> mac?
>>
>> Thank you very much
>>
>> Sing
>>
>>
>>
>>
>> ------------------------------
>>
>> Message: 2
>> Date: Tue, 16 Feb 2010 20:26:00 +0100
>> From: Daniel Seeliger <dsee...@gwdg.de>
>> Subject: Re: [PyMOL] Autodock plugin
>> To: pymol-users@lists.sourceforge.net
>> Message-ID: <201002162026.00620.dsee...@gwdg.de>
>> Content-Type: Text/Plain;  charset="iso-8859-1"
>>
>> Hi Sing,
>>
>> take a look into
>> ~/.ADplugin/pymol_autodock_plugin.conf
>> and set the path to the autodocktools scripts correctly. Then the
>> plugin
>> should find them.
>>
>> Cheers,
>> Daniel
>>
>> On Tuesday 16 February 2010 08:06:40 pm Kin Sing Stephen Lee wrote:
>>> Dear all,
>>>
>>> This is the first time for me to use the autodock plugin and I have
>>> some simple questions.  I'm using Macbook Pro (OS X v 10.5 -
>>> leopard).  Autodock and autodock tools run fine in the X11 terminal.
>>> In the autodock plugin, I need to put in the autodock tool program
>>> path,so I put in the path where I installed the autodock tool (under
>>> applications folder).  When I tried to prepare my receptor and  
>>> ligand
>>> file,  the plugin cannot find the autodock tools
>>> (prepare_receptor4.py
>>> as well as prepare_ligand4.py) so I am wondering where I can find  
>>> the
>>> autodock tools program path or is it possible to use the plugin in
>>> mac?
>>>
>>> Thank you very much
>>>
>>> Sing
>>>
>>>
>>> ---------------------------------------------------------------------------
>>> --- SOLARIS 10 is the OS for Data Centers - provides features such  
>>> as
>>> DTrace, Predictive Self Healing and Award Winning ZFS. Get Solaris
>>> 10 NOW
>>> http://p.sf.net/sfu/solaris-dev2dev
>>> _______________________________________________
>>> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
>>> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
>>> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>>>
>>
>> --
>> Dr. Daniel Seeliger
>> Computational Biomolecular Dynamics Group
>> Max-Planck-Institute for Biophysical Chemistry
>> Tel. +49 (0) 551-201-2310
>> http://wwwuser.gwdg.de/~dseelig
>>
>>
>>
>> ------------------------------
>>
>> Message: 3
>> Date: Wed, 17 Feb 2010 14:35:13 -0500
>> From: Jason Vertrees <jason.vertr...@schrodinger.com>
>> Subject: [PyMOL] Update & Submitting Bugs
>> To: pymol-users@lists.sourceforge.net
>> Message-ID:
>>      <79558d781002171135l2f74c6cax60c357bc8e4b...@mail.gmail.com>
>> Content-Type: text/plain; charset=ISO-8859-1
>>
>> PyMOLers,
>>
>> * In order to keep all bugs in one place please email your bugs to
>> h...@schrodinger.com instead of using the SourceForge tracker.
>> Schrodinger has a very nice bug tracker that we use; and, in the end
>> it's just better to not duplicate effort.
>>
>> * I started pushing small changes into the open-source code and more
>> are coming.  Please file bugs to the aforementioned address.
>>
>> * CEAlign is working on all my versions of PyMOL, so I'll be pushing
>> that to the open-source soon.
>>
>> * We now have another server for FreeMOL (which maps right back to
>> http://freemol.org/) and we also have control over the FreeMOL
>> project.  When I get back to my office (where the files live) I'll
>> update FreeMOL.
>>
>> Thanks,
>>
>> -- Jason
>>
>> --
>> Jason Vertrees, PhD
>> PyMOL Product Manager
>> Schrodinger, LLC
>>
>> (e) jason.vertr...@schrodinger.com
>> (o) +1 (603) 374-7120
>>
>>
>>
>> ------------------------------
>>
>> Message: 4
>> Date: Wed, 17 Feb 2010 21:15:06 -0800
>> From: Christoph Gohlke <cgoh...@uci.edu>
>> Subject: Re: [PyMOL] Update & Submitting Bugs
>> To: pymol-users@lists.sourceforge.net
>> Message-ID: <4b7cccda.90...@uci.edu>
>> Content-Type: text/plain; charset=ISO-8859-1
>>
>> What is the URL of the Schrodinger bug tracker? The PyMOL SourceForge
>> tracker is disabled.
>>
>> Thanks,
>>
>> Christoph
>>
>>
>> On 2/17/2010 11:35 AM, Jason Vertrees wrote:
>>> PyMOLers,
>>>
>>> * In order to keep all bugs in one place please email your bugs to
>>> h...@schrodinger.com instead of using the SourceForge tracker.
>>> Schrodinger has a very nice bug tracker that we use; and, in the end
>>> it's just better to not duplicate effort.
>>>
>>> * I started pushing small changes into the open-source code and more
>>> are coming.  Please file bugs to the aforementioned address.
>>>
>>> * CEAlign is working on all my versions of PyMOL, so I'll be pushing
>>> that to the open-source soon.
>>>
>>> * We now have another server for FreeMOL (which maps right back to
>>> http://freemol.org/) and we also have control over the FreeMOL
>>> project.  When I get back to my office (where the files live) I'll
>>> update FreeMOL.
>>>
>>> Thanks,
>>>
>>> -- Jason
>>>
>>
>>
>>
>> ------------------------------
>>
>> Message: 5
>> Date: Thu, 18 Feb 2010 00:30:49 -0500
>> From: Jason Vertrees <jason.vertr...@schrodinger.com>
>> Subject: Re: [PyMOL] Update & Submitting Bugs
>> To: Christoph Gohlke <cgoh...@uci.edu>
>> Cc: pymol-users@lists.sourceforge.net
>> Message-ID:
>>      <79558d781002172130y46763880j59563bd7a908c...@mail.gmail.com>
>> Content-Type: text/plain; charset=ISO-8859-1
>>
>> Christoph,
>>
>> Schrodinger's tracker is internal only.  To submit a bug, just email
>> your bugs to h...@schrodinger.com (for faster turnaround put  
>> something
>> like "PyMOL Bug" in the title).  They are immediately filed and
>> assigned to me.
>>
>> I chose to turn off the SourceForge tracker because I do not want to
>> miss bugs or spend my time duplicating tracking efforts, as I was.
>>
>> Thanks,
>>
>> -- Jason
>>
>> On Thu, Feb 18, 2010 at 12:15 AM, Christoph Gohlke <cgoh...@uci.edu>
>> wrote:
>>> What is the URL of the Schrodinger bug tracker? The PyMOL  
>>> SourceForge
>>> tracker is disabled.
>>>
>>> Thanks,
>>>
>>> Christoph
>>>
>>>
>>> On 2/17/2010 11:35 AM, Jason Vertrees wrote:
>>>> PyMOLers,
>>>>
>>>> * In order to keep all bugs in one place please email your bugs to
>>>> h...@schrodinger.com instead of using the SourceForge tracker.
>>>> Schrodinger has a very nice bug tracker that we use; and, in the  
>>>> end
>>>> it's just better to not duplicate effort.
>>>>
>>>> * I started pushing small changes into the open-source code and  
>>>> more
>>>> are coming. ?Please file bugs to the aforementioned address.
>>>>
>>>> * CEAlign is working on all my versions of PyMOL, so I'll be  
>>>> pushing
>>>> that to the open-source soon.
>>>>
>>>> * We now have another server for FreeMOL (which maps right back to
>>>> http://freemol.org/) and we also have control over the FreeMOL
>>>> project. ?When I get back to my office (where the files live) I'll
>>>> update FreeMOL.
>>>>
>>>> Thanks,
>>>>
>>>> -- Jason
>>>>
>>>
>>> ------------------------------------------------------------------------------
>>> Download Intel&reg; Parallel Studio Eval
>>> Try the new software tools for yourself. Speed compiling, find bugs
>>> proactively, and fine-tune applications for parallel performance.
>>> See why Intel Parallel Studio got high marks during beta.
>>> http://p.sf.net/sfu/intel-sw-dev
>>> _______________________________________________
>>> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
>>> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
>>> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>>>
>>
>>
>>
>> --
>> Jason Vertrees, PhD
>> PyMOL Product Manager
>> Schrodinger, LLC
>>
>> (e) jason.vertr...@schrodinger.com
>> (o) +1 (603) 374-7120
>>
>>
>>
>> ------------------------------
>>
>> Message: 6
>> Date: Wed, 17 Feb 2010 23:23:26 -0800
>> From: Christoph Gohlke <cgoh...@uci.edu>
>> Subject: Re: [PyMOL] Update & Submitting Bugs
>> To: Jason Vertrees <jason.vertr...@schrodinger.com>
>> Cc: pymol-users@lists.sourceforge.net
>> Message-ID: <4b7ceaee.4000...@uci.edu>
>> Content-Type: text/plain; charset=ISO-8859-1
>>
>> Good. Thanks for keeping PyMOL development going.
>>
>> Christoph
>>
>> On 2/17/2010 9:30 PM, Jason Vertrees wrote:
>>> Christoph,
>>>
>>> Schrodinger's tracker is internal only.  To submit a bug, just email
>>> your bugs to h...@schrodinger.com (for faster turnaround put
>>> something
>>> like "PyMOL Bug" in the title).  They are immediately filed and
>>> assigned to me.
>>>
>>> I chose to turn off the SourceForge tracker because I do not want to
>>> miss bugs or spend my time duplicating tracking efforts, as I was.
>>>
>>> Thanks,
>>>
>>> -- Jason
>>>
>>> On Thu, Feb 18, 2010 at 12:15 AM, Christoph Gohlke
>>> <cgoh...@uci.edu> wrote:
>>>> What is the URL of the Schrodinger bug tracker? The PyMOL
>>>> SourceForge
>>>> tracker is disabled.
>>>>
>>>> Thanks,
>>>>
>>>> Christoph
>>>>
>>>>
>>>> On 2/17/2010 11:35 AM, Jason Vertrees wrote:
>>>>> PyMOLers,
>>>>>
>>>>> * In order to keep all bugs in one place please email your bugs to
>>>>> h...@schrodinger.com instead of using the SourceForge tracker.
>>>>> Schrodinger has a very nice bug tracker that we use; and, in the
>>>>> end
>>>>> it's just better to not duplicate effort.
>>>>>
>>>>> * I started pushing small changes into the open-source code and
>>>>> more
>>>>> are coming.  Please file bugs to the aforementioned address.
>>>>>
>>>>> * CEAlign is working on all my versions of PyMOL, so I'll be
>>>>> pushing
>>>>> that to the open-source soon.
>>>>>
>>>>> * We now have another server for FreeMOL (which maps right back to
>>>>> http://freemol.org/) and we also have control over the FreeMOL
>>>>> project.  When I get back to my office (where the files live) I'll
>>>>> update FreeMOL.
>>>>>
>>>>> Thanks,
>>>>>
>>>>> -- Jason
>>
>>
>>
>> ------------------------------
>>
>> Message: 7
>> Date: Thu, 18 Feb 2010 09:30:34 -0800 (PST)
>> From: phani ghanakota <gphanionl...@yahoo.com>
>> Subject: [PyMOL] Regarding the Control panel in pymol
>> To: pymol-users@lists.sourceforge.net
>> Message-ID: <820965.90400...@web110014.mail.gq1.yahoo.com>
>> Content-Type: text/plain; charset="us-ascii"
>>
>> Hi,
>>
>> Is there a way to toggle on and off the control panel using a
>> command. So that viewing in the full screen mode would be more
>> pleasant.
>>
>> Thanks in advance.
>>
>>
>>
>>
>> -------------- next part --------------
>> An HTML attachment was scrubbed...
>>
>> ------------------------------
>>
>> Message: 8
>> Date: Thu, 18 Feb 2010 13:54:40 -0500
>> From: Jason Vertrees <jason.vertr...@schrodinger.com>
>> Subject: Re: [PyMOL] Regarding the Control panel in pymol
>> To: phani ghanakota <gphanionl...@yahoo.com>
>> Cc: pymol-users@lists.sourceforge.net
>> Message-ID:
>>      <79558d781002181054o70d34b6h803e7d385c88e...@mail.gmail.com>
>> Content-Type: text/plain; charset=ISO-8859-1
>>
>> On Thu, Feb 18, 2010 at 12:30 PM, phani ghanakota
>> <gphanionl...@yahoo.com> wrote:
>>> Is there a way to toggle on and off the control panel using a
>>> command. So that viewing in the full screen mode would be more
>>> pleasant.
>>
>> Phani,
>>
>> # turns off the internal UI
>> set internal_gui, 0
>>
>> # make PyMOL fullscreen; works on Windows and Mac; some issues on
>> Linux
>> fullscreen
>>
>> -- Jason
>>
>> --
>> Jason Vertrees, PhD
>> PyMOL Product Manager
>> Schrodinger, LLC
>>
>> (e) jason.vertr...@schrodinger.com
>> (o) +1 (603) 374-7120
>>
>>
>>
>> ------------------------------
>>
>> Message: 9
>> Date: Wed, 17 Feb 2010 16:07:05 +0000
>> From: Gabriela Schlau-Cohen <gsad...@hotmail.com>
>> Subject: [PyMOL] coordinate systems of pymol and povray
>> To: <pymol-users@lists.sourceforge.net>
>> Message-ID: <snt109-w258456a7a08f0be0bf5c52a4...@phx.gbl>
>> Content-Type: text/plain; charset="iso-8859-1"
>>
>>
>> Hi all,
>>
>> I am trying to load a pymol graphic into povray and then add on
>> geometric objects.  I exported and loaded the molecular model from
>> pymol successfully using the make_pov.py script from the wiki.  I
>> can then copy and paste that file into povray to generate the
>> molecules through povray.  Then, when I save the object in pymol to
>> get the molecular coordinates, the coordinates are in a different
>> system.
>> Can someone tell me how to get the molecular coordinates and a
>> povray file in the same coordinate system?
>> Thanks,Gabriela
>> _________________________________________________________________
>> Hotmail: Trusted email with powerful SPAM protection.
>> http://clk.atdmt.com/GBL/go/201469227/direct/01/
>> -------------- next part --------------
>> An HTML attachment was scrubbed...
>>
>> ------------------------------
>>
>> ------------------------------------------------------------------------------
>> Download Intel&#174; Parallel Studio Eval
>> Try the new software tools for yourself. Speed compiling, find bugs
>> proactively, and fine-tune applications for parallel performance.
>> See why Intel Parallel Studio got high marks during beta.
>> http://p.sf.net/sfu/intel-sw-dev
>>
>> ------------------------------
>>
>> _______________________________________________
>> PyMOL-users mailing list
>> PyMOL-users@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/pymol-users
>>
>>
>> End of PyMOL-users Digest, Vol 45, Issue 9
>> ******************************************
>>
>
>
>
>
> ------------------------------
>
> Message: 4
> Date: Thu, 18 Feb 2010 22:33:14 -0500
> From: "Kent Rossman" <kross...@med.unc.edu>
> Subject: [PyMOL] Save movie not working
> To: pymol-users@lists.sourceforge.net
> Message-ID: <4b7e067a.7070...@med.unc.edu>
> Content-Type: text/plain; charset=iso-8859-1; format=flowed
>
> Hi Delano,
>
> When I try to save an MPEG from the save movie menu, pymol works on
> writing out the movie, then i get an error that says mpeg_encode.exe  
> has
> encounteres a problem and has to close.  A file is written with 0
> bytes.  There was also an error that mpeg_encode was being used by
> another file/program...I think.  Can you help?
>
> Thanks,
> kr
>
> --
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
> Kent Rossman, Ph.D.
> Research Assistant Professor
> Department of Pharmacology
> Lineberger Comprehensive Cancer Center
> UNC-Chapel Hill, CB 7295
> Chapel Hill, NC 27599
>
> Tel:      919-962-1057
> Fax:      919-966-0162
> ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
>
>
>
>
>
>
> ------------------------------
>
> ------------------------------------------------------------------------------
> Download Intel&#174; Parallel Studio Eval
> Try the new software tools for yourself. Speed compiling, find bugs
> proactively, and fine-tune applications for parallel performance.
> See why Intel Parallel Studio got high marks during beta.
> http://p.sf.net/sfu/intel-sw-dev
>
> ------------------------------
>
> _______________________________________________
> PyMOL-users mailing list
> PyMOL-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/pymol-users
>
>
> End of PyMOL-users Digest, Vol 45, Issue 10
> *******************************************


------------------------------------------------------------------------------
Download Intel&#174; Parallel Studio Eval
Try the new software tools for yourself. Speed compiling, find bugs
proactively, and fine-tune applications for parallel performance.
See why Intel Parallel Studio got high marks during beta.
http://p.sf.net/sfu/intel-sw-dev
_______________________________________________
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