Peter, If you knew the positions of the end points of the lines you could make CGO lines, or you could just use a distance measure between two pseudoatoms and modify some label/dash settings:
# make two new pseudoatoms, just for # making a distance measure between them # Specify your own position vectors in pos=[x, y, z] pseudoatom aa, pos=[10.0, -14.0, 33.0] pseudoatom bb, pos=[-15.3, 44.5, 8.3] # create distance between the two atoms distance d1, /aa/////1, /bb/////1 # clean up the representation to make this look # morel like a solid line set dash_gap, 0 set dash_radius, 0.55 set dash_round_ends, 0 set dash_color, 0xffcc00, d1 hide labels, d1 # see what it looks like ray traced orient ray Cheers, -- Jason On Wed, May 12, 2010 at 6:37 AM, peter hudson <peter.hudson.pe...@gmail.com> wrote: > > Hello all > i want draw axes or lines in my figure which corelates with structure and > function relation of my protein structure. I have enclosed a sample figure. > which would indicate , what exactly i want to draw in the picture. How to > draw this in pymol? I would like the simple scripts.I would appreciate the > suggestions. please, have look into the rrf.png file. > > > Thanks in advance > peter > > ------------------------------------------------------------------------------ > > > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
