Hi Tomas,

have you checked PISA?
http://pdbe.org/pisa

You can also run PISA locally, it's part of the CCP4 suite (however,
the output is not that easy to parse).
http://www.ccp4.ac.uk/

Cheers,
 Thomas

2011/3/14 Tomáš Kučera:
> Hello pymol users,
>
> can you help me please how to calculate interaction surface between 2
> subunits of my protein?
>
> I found this website http://crick.mbu.iisc.ernet.in/~PIC/index.html,
> but I would rather use pymol if possible.
>
> Thanks a lot, Tomas

-- 
Thomas Holder
MPI for Developmental Biology
Spemannstr. 35
D-72076 Tübingen

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