Hi,
I tried it in white WRL as you suggested and that loaded into Shapeways
ok. Green would also load...
The same file, then set to CMYK colors (menu DISPLAY / COLOR SPACE / CMYK
) would not load...
Any help would be great!
Thanks for all this!
Ciao,
Bob
On Sat, May 3, 2014 at 6:44 PM, Sampson, Jared <jared.samp...@nyumc.org>wrote:
> Hi Bob -
>
> The reason you're getting these errors is because having negative values
> in a color tuple is not meaningful (you can't have a negative amount of
> color), and results in undefined behavior. RGB colors use a number in the
> range 0.0-1.0 (inclusive) for each value in the tuple. What color are you
> using for your model before exporting VRML? Try setting everything to
> white (`color white` on the command line) and see what that does.
>
> Cheers,
> Jared
>
> --
> Jared Sampson
> Xiangpeng Kong Lab
> NYU School of Medicine
> kong.med.nyu.edu
> ------------------------------
> *From:* Grateful Frog [gratefulf...@gmail.com]
> *Sent:* Friday, May 02, 2014 7:07 PM
> *To:* Marcelo Marcet
> *Cc:* pymol-users@lists.sourceforge.net
> *Subject:* Re: [PyMOL] Pymol wrl output
>
> these are the errors that Shapeways sent back:
> ----
> Unfortunately, the model you recently uploaded TMD11Ultra.wrl did not pass
> our initial printability checks, so it's not yet ready for 3D printing.
> Printability Error:
>
> - Model failed during repair. This is likely due to problems merging
> shells.
>
> Please visit your 3D model page to update your file:
> http://www.shapeways.com/model/upload-and-buy/1932482<http://www.shapeways.com/model/upload-and-buy/1932482?etId=14290783&utm_source=automated-contact&utm_medium=email&utm_campaign=model-processing-failed>
>
> Our tutorials and
> FAQ<http://www.shapeways.com/support?etId=14290783&utm_source=automated-contact&utm_medium=email&utm_campaign=model-processing-failed>can
> be super helpful for more detailed information, or you can always ask
> the community a specific question on our
> forum<http://www.shapeways.com/forum?etId=14290783&utm_source=automated-contact&utm_medium=email&utm_campaign=model-processing-failed>
>
> If you're stuck or have any questions, don't hesitate to reach out at
> serv...@shapeways.com. Please include the file as an attachment to the
> email, as well as any notes on your design, so we can help you solve your
> problem as quickly as possible.
>
> Additional non-critical errors:
>
> - Invalid field, unparsable value, name: Material.diffuseColor ,
> value: [-1.0, -1.0, 1.0]. Value ignored.
> - Invalid field, unparsable value, name: Material.diffuseColor ,
> value: [-1.0, -1.0, 1.0]. Value ignored.
> - Invalid field, unparsable value, name: Material.diffuseColor ,
> value: [-1.0, -1.0, 1.0]. Value ignored.
>
> -> this goes on for tons of lines...
>
>
>
> On Sat, May 3, 2014 at 12:39 AM, Grateful Frog <gratefulf...@gmail.com>wrote:
>
>> Hi Marcelo,
>>
>> Thanks for your help and suggestion!
>>
>> I did that and the surface is much nicer.
>>
>> However, the Pymol rendering in VRML still won't load to Shapeways
>> without error.
>>
>> I have to re-render in VRML in MeshLab.
>>
>> My goal is to do it all in Pymol.
>>
>> Any more ideas would be great!
>>
>> Ciao,
>> Bob
>>
>>
>> On Sat, May 3, 2014 at 12:17 AM, Marcelo Marcet <mmar...@nait.ca> wrote:
>>
>>> Hi Bob,
>>>
>>> Before you save your file from pymol try increasing the quality to max,
>>> then save as VRML. This increases the number of polygons in the file and
>>> after exporting from meshlab the final molecule will look a lot smoother.
>>>
>>> Cheers,
>>> Marcelo
>>>
>>> On May 2, 2014, at 2:15 PM, Grateful Frog <gratefulf...@gmail.com>
>>> wrote:
>>>
>>> > Hi all,
>>> >
>>> > I'm new to this list and to this tool. I have encountered a problem
>>> with exporting as wrl in pylolk 1.7 that I compiled on my Ubuntu 12.04
>>> platform.
>>> >
>>> > I load a PDB file and it displays fine.
>>> >
>>> > I then type the command "show surface" and this works fine, too.
>>> >
>>> > I then save image as VRML 2, and write the file to disk.
>>> >
>>> > This file can be visualized fine in MeshLab.
>>> >
>>> > However, it cannot be 3D printed at Shapeways. The error message does
>>> not say what is wrong.
>>> >
>>> > The work-around that I have found is to open the wrl file, generated
>>> by Pymol, in Meshlab and re-save another copy as wrl, but generated by
>>> Meshlab. This new file can be 3D printed at Shapeways.
>>> >
>>> > However, the look of the surface is not as nice when it comes out of
>>> Meshlab, as it is in Pymol...
>>> >
>>> > Any thoughts would be great!
>>> >
>>> > Thanks,
>>> > Bob
>>> >
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>>
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