Sometimes it is easier to see the overall structure when looking at a
single unit cell rather than the symmetry mates within a certain distance.
You might want to try the supercell
<http://www.pymolwiki.org/index.php/Supercell> script. Otherwise I tend to
generate symmetry mates multiple times and then hide or delete the ones
that don't match the expected biological assembly.
-Spencer
On Fri, Aug 15, 2014 at 9:26 AM, sunyeping <sunyep...@aliyun.com> wrote:
> Dear pymol users,
>
> I want to operate a structure whose crystal structure has one molecule in
> one asymmetry unit. I try to display its polymer. I loaded the structure
> and used "generate" command in the pymol GUI interface:
> A>generate>symmetry mates>4A, and then many copies of this molecure
> appeared but in a quite disoder pattern. According to the paper that
> published this structure, it is a polymer arranged in a linear pattern.
> Could you tell me how can I display this linear polymer? Thanks in advance.
>
> Yeping Sun
>
> Institute of Microbiology, Chinese Academy of Sciences
>
>
>
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